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. 2020 Feb 20;6(1):7. doi: 10.3390/ncrna6010007
ncRNA non-coding RNA
vtRNA vault RNA
3′-UTR three prime untranslated region
PrCa Prostate Cancer
PSA Prostate-Specific Antigen
nc886 non-coding RNA 886 (vtRNA2-1)
Pre-miR-886 hsa-mir-886 precursor of microRNAs hsa-miR-886-3p and 5p
snc886s small non-coding RNA derived from nc886
snc886-3p small non-coding RNA derived from nc886 at 3′ region
snc886-5p small non-coding RNA derived from nc886 at 5′ region
svtRNA2-1 small non-coding RNA derived from vtRNA2-1/nc886
PAR-CLIP photoactivatable ribonucleoside-enhanced crosslinking and immunoprecipitation
PRAD-TCGA Prostate Adenocarcinoma—The Cancer Genome Atlas
SRA Sequence Read Archive
GEO Gene Expression Omnibus
DEG Differentially Expressed Gene
MFE Maximum Free Energy
RISC RNA-induced silencing complex
qRT-PCR quantitative Reverse Transcription Polymerase Chain Reaction
TSS200nt 200nt region upstream to the transcription start site
GSEA Gene Set Enrichment Analysis
MTT 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-2H-tetrazolium bromide