TABLE 2.
RNA binding proteins interacting with LINC00574
| RNA binding proteina | Binding site in LINC00574 | Seq type | Cell line | Accession |
|---|---|---|---|---|
| HNRNPA1 | chr6:170202698–170202865[+] | iCLIP | HEK 293T | GSM2221653 |
| HNRNPA1 | chr6:170202699–170202910[+] | iCLIP | HEK 293T | GSM2221654 |
| HNRNPA1 | chr6:170202899–170202957[+] | iCLIP | HEK 293T | GSM2221653 |
| SRSF1 | chr6:170200944–170200945[+] | eCLIP | HepG2 | ENCSR989VIY |
| SRSF1 | chr6:170202217–170202265[+] | eCLIP | HepG2 | ENCSR989VIY |
| SRSF1 | chr6:170202714–170202845[+] | iCLIP | HEK 293T | GSM2221667 |
| SRSF1 | chr6:170202732–170202871[+] | iCLIP | HEK 293T | GSM2221666 |
| SRSF1 | chr6:170202760–170202870[+] | iCLIP | HEK 293T | GSM2221668 |
| SRSF1 | chr6:170202762–170202853[+] | iCLIP | HEK 293T | GSM2221664 |
| SRSF1 | chr6:170202767–170202861[+] | iCLIP | HEK 293T | GSM2221665 |
| DKC1 | chr6:170190453–170190468[+] | PAR-CLIP | HEK 293 | GSM1067866 |
| DKC1 | chr6:170202508–170202531[+] | PAR-CLIP | HEK 293 | GSM1067866 |
| HNRNPC | chr6:170201725–170201734[+] | eCLIP | HepG2 | ENCSR550DVK |
a
Data obtained from starBase data base.