Table 4. Results of forward simulations showing the effect of linked positive selection on b, Δ, and summary statistics of the site frequency spectrum for different values of the mean selective value of beneficial mutations Sb and the population size N.
| N | Sb | Sd | β | b | Δ | π4 | π0/ π4 | ρD | D | |
|---|---|---|---|---|---|---|---|---|---|---|
| Nr = 0 | 100 | 20 | 1000 | 0.4 | 0.49 | 0.09 | 1.39 | 0.091 | 874.6 | −0.46 |
| 100 | 50 | 1000 | 0.4 | 0.61 | 0.21 | 1.18 | 0.094 | 909.9 | −0.70 | |
| 100 | 100 | 1000 | 0.4 | 0.72 | 0.32 | 1.06 | 0.111 | 994.2 | −0.77 | |
| 100 | 10 | 1000 | 0.4 | 0.46 | 0.06 | 1.52 | 0.082 | 739.9 | −0.36 | |
| 500 | 10 | 1000 | 0.4 | 0.65 | 0.25 | 5.72 | 0.09 | 228.6 | −0.77 | |
| 1000 | 10 | 1000 | 0.4 | 0.81 | 0.41 | 10.35 | 0.094 | 132.4 | −0.92 | |
| Nr = 1e-3 | 100 | 20 | 1000 | 0.4 | 0.06 | −0.34 | 1.64 | 0.076 | 662.5 | −0.18 |
| 100 | 50 | 1000 | 0.4 | 0.63 | 0.23 | 1.48 | 0.087 | 738.1 | −0.28 | |
| 100 | 100 | 1000 | 0.4 | 0.72 | 0.32 | 1.17 | 0.097 | 966.8 | −0.58 | |
| 100 | 10 | 1000 | 0.4 | 0.09 | 0.03 | 1.70 | 0.075 | 1011.1 | −0.12 | |
| 500 | 10 | 1000 | 0.4 | 0.61 | 0.21 | 7.54 | 0.084 | 163.9 | −0.26 | |
| 1000 | 10 | 1000 | 0.4 | 0.68 | 0.28 | 13.67 | 0.083 | 99.7 | −0.37 | |
| Nr = 1e-2 | 100 | 20 | 1000 | 0.4 | 0.43 | 0.03 | 1.74 | 0.077 | 739.3 | −0.04 |
| 100 | 50 | 1000 | 0.4 | 0.63 | 0.23 | 1.67 | 0.081 | 917.6 | −0.12 | |
| 100 | 100 | 1000 | 0.4 | 0.78 | 0.38 | 1.61 | 0.084 | 898.4 | −0.15 | |
| 100 | 10 | 1000 | 0.4 | 0.33 | −0.07 | 1.76 | 0.080 | 325.7 | −0.01 | |
| 500 | 10 | 1000 | 0.4 | 0.69 | 0.29 | 8.55 | 0.073 | 165.4 | −0.06 | |
| 1000 | 10 | 1000 | 0.4 | 0.99 | 0.59 | 16.7 | 0.072 | 86.3 | −0.12 |
ρD is the correlation between πS and Tajima’s D.