Table 2.
Multiple sequence alignment of the Nucleocapside protein from taxonomically-related coronaviruses.
| Virus | Protein GI | Identity (%) | Alignment length | Mismatches | e-value |
|---|---|---|---|---|---|
| Bat CoV | QHR63308.1 | 99.045 | 419 | 4 | – |
| SARS-CoV | AAX16200.1 | 90.284 | 422 | 38 | – |
| Pangolin CoV | NC_PangolinCoV | 87.857 | 420 | 8 | – |
| Camel CoV | QGV13487.1 | 48.492 | 398 | 179 | 7.14e-93 |
| MERS-CoV | YP_009047211.1 | 48.492 | 398 | 179 | 7.14e-93 |
| Dromedarius CoV | QCI31487.1 | 48.492 | 398 | 179 | 9.55e-93 |
| Bovine CoV | NP_150083.1 | 38.938 | 339 | 158 | 5.97e-54 |
| H-Enteric CoV | ACJ35489.1 | 38.348 | 339 | 160 | 1.98e-54 |
| Canine CoV | AQT26504.1 | 38.348 | 339 | 160 | 9.97e-54 |
| Avian CoV | NP_040838.1 | 29.664 | 327 | 210 | 2.00e-31 |