Table 2.
List of genes analyzed by TaqMan Low Density Array (TLDA).
| Assay ID | Gene symbol | Gene name |
|---|---|---|
| Hs99999901_s1 | 18S | — |
| Hs99999905_m1 | GAPDH | glyceraldehyde-3-phosphate dehydrogenase |
| Hs99999147_m1 | TP53 | tumor protein 53 |
| Hs01076078_m1 | EGFR | epidermal growth factor receptor |
| Hs00609566_m1 | IGFR | insulin-like growth factor 1 receptor |
| Hs00179845_m1 | MET | met proto-oncogene |
| Hs00176538_m1 | HER3 | human epidermal growth factor receptor 3 |
| Hs00180679_m1 | PIK3CA | phosphatidylinositol-4.5-bisphosphate 3-kinase |
| Hs00829813_s1 | PTEN | phosphatase and tensin homolog |
| Hs00178289_m1 | AKT1 | v-akt murine thymoma viral oncogene homolog 1 |
| Hs00234508_m1 | MTOR | mechanistic target of rapamycin (serine/threonine kinase) |
| Hs00269944_m1 | BRAF | v-raf murine sarcoma viral oncogene homolog B |
| Hs00364282_m1 | KRAS | Kirsten rat sarcoma viral oncogene homolog |
| Hs01046830_m1 | MAPK1 | mitogen-activated protein kinase 1 |
| Hs00385075_m1 | MAPK3 | mitogen-activated protein kinase 3 |
| Hs00170630_m1 | FOS | FBJ murine osteosarcoma viral oncogene homolog |
| Hs00153408_m1 | MYC | v-myc avian myelocytomatosis viral oncogene homolog |
| Hs00153451_m1 | E2F1 | E2F transcription factor 1 |
| Hs01548894_m1 | CDK2 | cyclin-dependent kinase 2 |
| Hs00175935_m1 | CDK4 | cyclin-dependent kinase 4 |
| Hs01026372_m1 | CDK6 | cyclin-dependent kinase 6 |
| Hs00355782_m1 | CDKN1A | cyclin-dependent kinase inhibitor 1A |
| Hs00923893_m1 | CDKN2A | cyclin-dependent kinase inhibitor 2A |
| Hs00153277_m1 | CDKN1B | cyclin-dependent kinase inhibitor 1B |
| Hs00175938_m1 | CDKN1C | cyclin-dependent kinase inhibitor 1C |
| Hs00171105_m1 | CCNA1 | cyclin A1 |
| Hs99999188_m1 | CCNB1 | cyclin B1 |
| Hs00277039_m1 | CCND1 | cyclin D1 |
| Hs00233356_m1 | CCNE1 | cyclin E1 |
| Hs00967506_m1 | CHEK1 | checkpoint kinase 1 |
| Hs00200485_m1 | CHEK2 | checkpoint kinase 2 |
| Hs01078066_m1 | RB1 | retinoblastoma 1 |
| Hs99999147_m1 | TP53 | tumor protein p53 |
| Hs00180269_m1 | BAX | BCL2-associated X protein |
| Hs00608023_m1 | BCL2 | B-cell CLL/lymphoma 2 |
| Hs01018151_m1 | CASP8 | caspase 8 |
| Hs00154260_m1 | CASP9 | caspase 9 |
| Hs00234387_m1 | CASP3 | caspase 3 |
| Hs00745222_s1 | XIAP | X-linked inhibitor of apoptosis |
| Hs01075529_m1 | NOS2 | nitric oxide synthase 2. inducible |
| Hs01023894_m1 | CDH1 | cadherin 1, type 1, E-cadherin (epithelial) |
| Hs01547054_m1 | PLAU | plasminogen activator. urokinase |
| Hs00900055_m1 | VEGF | vascular endothelial growth factor A |
| Hs00234579_m1 | MMP9 | matrix metallopeptidase 9 |
| Hs00173237_m1 | BRCA1 | breast cancer 1 |
| Hs00242302_m1 | PARP1 | poly (ADP-ribose) polymerase 1 |
| Hs00193931_m1 | PARP2 | poly (ADP-ribose) polymerase 2 |
| Hs00184491_m1 | ABCB1 | ATP-binding cassette, sub-family B (MDR/TAP), member 1 |
| Hs00184979_m1 | ABCG2 | ATP-binding cassette, sub-family G (BCRP1), member 2 |