TABLE 4.
Significant bacterial OTUs in third trimester in PTB vs. term samples.
OTU | Genera | Log fold change | Adj. P-value | DiGiulio | Romero | Hyman | Callahan | Stout |
Otu4172 | Lactobacillus | −8.00E-09 | 9.06E-16 | Reported | Reported | Reported | ||
Otu868 | Gardnerella | 0.11 | 3.24E-04 | Significant | Reported | Significant | ||
Otu1238 | Clostridium sensu stricto | 0.03 | 1.58E-03 | |||||
Otu10429 | Aerococcus | 0.02 | 1.64E-02 | Reported | ||||
Otu22110 | Lactobacillus | 0.11 | 2.50E-02 | Reported | Reported | Reported |
For each OTU we show the internal OTU label, the genera label, log fold change between preterm and term models (where positive values show a higher change in preterm), the adjusted p-value by FDR (see section “Materials and Methods”) for the model and whether the taxa were “Significant” or “Reported” in the original cohorts. “Significant” represents a reported significant difference between term and PTB abundance. “Reported” represents abundance measurement reported in the original cohorts in the original papers.