Table 1.
Oligonucleotide Sequences
Name | Forward Sequence (5’-3’) | Reverse Sequence (5’-3’) | Probe Sequence FAM-5’—ZEN™—3’IABkFQ | Amplicon Size | Comment |
TsolR11 | GACTGACTGACTGACTGACTTG | ACAGCCTGACAGCTTGAC | TGACATGTGbCCGCATTGTTGTCAC | 98 | … |
TsolR12 | CTTGTCACACGCCTCACT | CCGCATTGTTGTCACTTGTC | ACTGACTGAbCTGACTGACTGACTGACT | 75 | Detects Taenia saginataa |
TsolR13 | AGTCAGTCAGTCAGTCAGTCA | CTGTCAAGCTGTCAGGCTGT | TGTCAGTGAbGGCGTGTGACAAGAC | 71 | … |
Sequences used in the most sensitive assays targeting repetitive elements for quantitative polymerase chain reaction detection of Taenia solium. Number of repeats is based on coverage.
aAlso possibly Taenia asiatica, based on Basic Local Alignment Search Tool results, not proven experimentally.
bZEN™ insert location.