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. 2019 Jun 19;70(9):1855–1864. doi: 10.1093/cid/ciz526

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© The Author(s) 2019. Published by Oxford University Press for the Infectious Diseases Society of America.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 1. — Maximum likelihood SNV tree, using only the earliest isolated sample from all 62 patients. SNVs were identified from mapping reads to the ATCC19977 Mycobacterium abscessus subsp. abscessus reference genome. Sample names are highlighted in color, based on what hospital they were isolated from: Great Ormond Street Hospital, London, United Kingdom; Hospital Clínic, Barcelona, Spain; Hospital de la Santa Creu i Sant Pau, Barcelona, Spain; and Hospital Vall d’Hebron, Barcelona, Spain. The scale bar represents the number of SNVs and the node bootstrap scores below are shown if below 75. Abbreviation: SNV, single nucleotide variant.