Table 2.
Genetic correlations between sleep phenotypes and PTSD, females only
Genetic correlation with PTSD | |||||
---|---|---|---|---|---|
Source† | Phenotype | N | SNP- heritability | r g (SE) | p value |
PTSD [17] | |||||
PGC, Freeze 1.5 | PTSD, binary | 15 656 (6128 Ca; 9528 Co) | 0.21 (0.05) | — | — |
PGC, Freeze 2‡ | PTSD, binary | 86 600 (12 973 Ca; 73 627 Co) | 0.10 (0.02) | — | — |
Sleep phenotypes | |||||
Lane et al. [19] | Insomnia symptoms,§ binary | 30 445 (NR Ca; NR Co) | 0.14 (0.02)¶ | 0.26 (0.10) | 0.007* |
Hammerschlag et al. [27] | Insomnia symptoms,# binary | 59 367 (19 521 Ca; 39 846 Co) | 0.08 (0.01) | 0.44 (0.12) | 0.0002* |
Lane et al. [19] | Excessive daytime sleepiness, continuous | 59 576 | 0.06 (0.01) | −0.14 (0.10)e | 0.148 |
Lane et al. [19] | Sleep duration, continuous | 59 365 | 0.08 (0.01) | 0.07 (0.11)e | 0.498 |
Ca, cases; Co, controls; NR, not reported; PGC, Psychiatric Genomics Consortium; PTSD, posttraumatic stress disorder; SNP, single nucleotide polymorphism.
†All sources analyzed data from the UK Biobank. The description “UK Biobank GWAS” refers to a series of analyses conducted on UK Biobank data (2017 release), which can be accessed at: http://www.nealelab.is/blog/2017/7/19/rapid-gwas-of-thousands-of-phenotypes-for-337000-samples-in-the-uk-biobank/ (last accessed May 30, 2019)
‡This is the PTSD phenotype used for genetic correlations presented in this manuscript; both PTSD heritabilities were scaled to a population prevalence of 30%.
§Insomnia cases were defined as individuals endorsing “Often” on the sleeplessness item, while controls included individuals endorsing “Never/Rarely.” Individuals endorsing “Sometimes” were designated as missing and not used in analysis.
#Insomnia cases were defined as individuals endorsing “Often” on the sleeplessness item, while controls were those endorsing “Never/Rarely” and “Sometimes.”
¶This heritability estimate was not published; instead it was estimated from downloaded summary statistic data using LDSC. Otherwise, the estimate was taken from the original source publication.
*p < 0.05.