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. 2020 Mar 6;9(3):195. doi: 10.3390/pathogens9030195

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© 2020 by the authors.

Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).

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Phylogenetic relationships of the 53 C. braakii isolates (lineage III) from this study and our previous study [10]. The phylogenetic tree of the 53 C. braakii isolates was constructed using the concatenated sequences of the seven housekeeping genes by the neighbor-joining method. Bootstrap values of 50% or more from 1000 replicates were shown. The presence of ESBLs and qnr genes, source, year, NDR (number of drugs resistant to), adhesion, LDH and antibiotic resistance phenotype of an isolate is shown on the right. The tree was constructed using the neighbor joining algorithm. ST, D, F, H, and LDH indicate sequence types, isolates from diarrheal patients, foods and healthy individuals, and lactate dehydrogenase, respectively. Adhesion index: ***, >50; **, >1 and <50; *, <1; +/-, ambivalent or no adhesion; -, no adhesion.