FIG 1.

Prophage-rich content of A. nasoniae strain FIN’13’s main chromosome. Inwards, the first circle represents the complete and closed chromosome generated from the hybrid assembly of the Nanopore, PacBio, and Illumina data. The different colors depict intact (green), questionable (blue), and incomplete (red) phage elements, as estimated by PHASTER, while black bars represent the seven rRNA operons. The second circle depicts the transposable elements identified in the A. nasoniae genome. The third circle shows uniquely mapped long Nanopore reads spanning the prophage regions. Only the top five largest reads spanning each region are shown. The fourth circle shows the corresponding assembly using only the Illumina data. The innermost circle represents patterns of GC skew. Colored ribbons in the interior connect the different synteny blocks (>5 kb). The scale is in kilobase pairs.