Table 3.
Species | Strain No.1 | Host | Location Country | GenBank Accession Numbers2 | References | |
---|---|---|---|---|---|---|
ITS | GAPDH | |||||
Alternaria alternata | EGS 34.0160 | Arachis hypogaea | India | AF071346 | AF081400 | [24] |
Bipolaris axonopicola | BRIP 11740 | Axonopus fissifolius | Australia | KX452443 | KX452409 | [23,26] |
B. bamagaensis | BRIP 13577 | Brachiaria subquadripara | Australia | KX452445 | KX452411 | [23,26] |
B. chloridis | CBS 242.77 | Chloris gayana | Australia | JN192372 | JN600961 | [5,6] |
B. cynodontis | ICMP 6128 | Cynodon dactylon | New Zealand | JX256412 | JX276427 | [25] |
B. cynodontis | CBS 109894 | Cynodon dactylon | Hungary | KJ909767 | KM034838 | [6] |
B. drechsleri | CBS 136207 | Microstegium vimineum | USA | KF500530 | KF500533 | [6] |
B. drechsleri | CBS 136208 | Microstegium vimineum | USA | KF500532 | KF500535 | [6] |
B. heveae | CBS 241.92 | Hevea sp. | Nigeria | KJ909763 | KM034843 | [6,23] |
B. luttrellii | 14643-1 | Dactyloctenium aegyptium | Australia | AF071350 | AF081402 | [6,24] |
B. maydis | CBS 137271/C5 | Zea mays | USA | AF071325 | KM034846 | [6,24] |
B. maydis | AR 5182 | Sorghum bicolor | Japan | KM230388 | KM034844 | [6] |
B. maydis | AR 5183 | Sorghum bicolor | Japan | KM230390 | KM034848 | [6] |
B. maydis | M 1122/C4 | Zea mays | USA | KM230389 | KM034847 | [6] |
B. maydis | CBS 136.29 | Zea mays | Japan | KJ909769 | KM034845 | [6] |
B. oryzae | MFLUCC 100715 | Oryza sativa | Thailand | JX256416 | JX276430 | [25] |
B. oryzae | MFLUCC 100733 | Oryza sativa | Thailand | JX256417 | KM042898 | [25] |
B. oryzae | MAFF 235499 | Oryza sativa | Japan | KJ922383 | KM042897 | [6] |
B. oryzae | AR3797 | Panicum virgatum | USA | KM230392 | KM042894 | [6] |
B. oryzae | AR5204 | Panicum virgatum | USA | KM230393 | KM042895 | [6] |
B. saccharicola | CBS 155.26 | Saccharum officinarum | —3 | KY905674 | KY905686 | [22] |
B. saccharicola | CBS 325.64 | Saccharum officinarum | — | KY905675 | KY905687 | [22] |
B. salviniae | BRIP 16571 | Salvinia auriculata | Brazil | KJ415535 | KJ415411 | [23,26] |
B. setariae | CBS141.31 | — | — | EF452444 | EF513206 | [22,27] |
B. setariae | CBSHN01 | Cassava | China | GU290228 | — | [28] |
B. setariae | CPC 28802 | Imperata cylindrica | Thailand | MF490811 | MF490833 | [23,29] |
B. setariae | UTHSC 05-3211 | Human | USA | HE792921 | — | [21] |
B. sorokiniana | MAFF 236448 | Zea mays | Japan | KJ909792 | KM034826 | [6] |
B. sorokiniana | MAFF 235501 | Zea mays | Japan | KJ909791 | KM034825 | [6] |
B. sorokiniana | MAFF 238877 | Hordeum vulgare | Japan | KJ909790 | KM034824 | [6] |
B. sorokiniana | CBS 110.14 | Hordeum sp. | USA | KJ922381 | KM034822 | [6,23] |
B. sorokiniana | CPC 28832 | Triticum aestivum | Thailand | MF490812 | MF490834 | [23,29] |
B. zeae | BRIP 11512 | Zea mays | Australia | KJ415538 | KJ415408 | [23,30] |
B. zeicola | AR5166 | Sorghum sp. | USA | KJ909788 | KM034813 | [6] |
B. zeicola | AR 5168 | Sorghum sp. | USA | KM230397 | KM034814 | [6] |
B. zeicola | FIP 532 | Zea mays | USA | KM230398 | KM034815 | [6] |
Curvularia ellisii | CBS193.62 | Air | Pakistan | JN192375 | JN600963 | [5] |
C. hawaiiensis | CBS 173.57 | Oryza sativa | Hawaii | JN601029 | JN600966 | [5] |
C. hawaiiensis | BRIP 10971 | Chloris gayana | Australia | JN601030 | JN600967 | [5] |
C. hawaiiensis | BRIP 15933 | Chloris gayana | Australia | JN601028 | JN600965 | [5,6,8] |
C. inaequalis | CBS 102.42 | Sand dune soil | France | KJ922375 | KM061787 | [6] |
C. lunata | CBS730.96 | Human lung biopsy | USA | JX256429 | JX276441 | [25] |
C. lunata | CBS157.34 | Unknown | Indonesia | JX256430 | JX276442 | [25] |
C. pallescens | CBS 156.35 | Air | Java | KJ922380 | KM083606 | [6] |
C. richardiae | BRIP 4371 | Richardia brasiliensis | Australia | KJ415555 | KJ415391 | [30] |
C. spicifera | CBS 274.52 | Soil | Spain | JN192387 | JN600979 | [5,6] |
C. trifolii | ICMP6149 | Setaria glauca | New Zealand | JX256434 | JX276457 | [25] |
Drechslera avenae | CBS 189.29 | — | — | AY004795 | AY004827 | [8,31] |
D. avenae | CBS 279.31 | — | — | AY004796 | AY004828 | [8,31] |
D. avenae (Pyrenophora chaetomioides) | DAOM 208989 | — | — | AF081445 | AF081371 | [8] |
D. dactylidis | DAOM 92161 | — | — | AY004781 | AY004812 | [8,31] |
D. erythrospila | CBS 108941 | — | — | AY004782 | AY004813 | [8,31] |
D. erythrospila | DAOM 55122 | — | — | AY004783 | AY004814 | [8,31] |
Exserohilum holmii | BRIP 12679 | Dactyloctenium radulnas | Australia | LT837846 | LT882542 | [32] |
E. minor | BRIP 14614 | Dactyloctenium aegyptium | Australia | LT837468 | LT715885 | [32] |
E. pedicellatum | CBS 375.76 | Oryza sativa | Turkey | KT265259 | LT715879 | [32] |
E. rostratum | PZ-3-4 | Zea mays | China | MG780267 | MK558815 | In this study |
E. rostratum | PZ-3-40 | Zea mays | China | MG780268 | MK558816 | In this study |
E. rostratum | ER9-8-1 | Zea mays | China | MG780269 | MK558817 | In this study |
E. rostratum | BRIP 10995 | Zea mays | Australia | LT837823 | LT882566 | [32] |
E. rostratum | BRIP 11416 | Zea mays | Australia | LT837466 | LT883543 | [32] |
E. rostratum | BRIP 11417 | Zea mays | Australia | LT837836 | LT882553 | [32] |
E. turcicum | BRIP 12267 | Sorghum bicolor | Australia | LT837482 | LT883553 | [32] |
E. turcicum | BRIP 13326 | Sorghum sudanense | Australia | LT837480 | LT883551 | [32] |
E. turcicum | CBS 195.26 | Zea mays | Indonesia | LT837485 | LT882583 | [32] |
E. turcicum | CBS 330.64 | Zea mays | USA | LT837484 | LT715874 | [32] |
Note: 1 AR, FIP: Isolates housed in Systematic Mycology and Microbiology Laboratory, United States Department of Agriculture, Agricultural Research Service, Beltsville, Maryland; BRIP: Plant Pathology Herbarium, Department of Primary Industries, Queensland, Australia; CBS: CBS-KNAW Fungal Biodiversity Centre, Utrecht, The Netherlands; DAOM: Plant Research Institute, Department of Agriculture (Mycology), Ottawa, Canada; CPC: working collection of P.W. Crous, housed at the Westerdijk Fungal Biodiversity Institute, Utrecht, the Netherlands; EGS: Collection of E. G. Simmons; ICMP: International Collection of Microorganisms from Plants, Landcare Research, Private Bag 92170, Auckland, New Zealand; MAFF: Ministry of Agriculture, Forestry and Fisheries, Tsukuba, Ibaraki, Japan; MFLUCC: Mae Fah Luang University Culture Collection, Chiang Rai, Thailand. 2 ITS: internal transcribed spacers and intervening 5.8S nrDNA; GAPDH: partial glyceraldehyde-3-phosphate dehydrogenase gene. 3—, not available.