Table 2.
List of 20 composition features, sorted in accordance to a decreasing z-value, showing a significant depletion in overlapping genes (z-value >4.41; two-tailed P = 10-5; 319 degrees of freedom) with respect to non-overlapping genes.
| Composition feature | Mean % content in overlapping genes (sd) | Mean % content in non-overlapping genes (sd) | Mean % difference between overlap and non-overlap | z-value |
|---|---|---|---|---|
| Tyr | 2.2 (1.3) | 3.6 (0.7) | -1.4 | 12.8 |
| TA | 3.6 (1.5) | 5.3 (1.8) | -1.7 | 12.6 |
| AT | 5.7 (1.9) | 7.1 (1.8) | -1.4 | 12.2 |
| Amino acids with low codon degeneracy | 36.9 (6.1) | 41.2 (3.9) | -4.3 | 12.1 |
| TAT(Tyr) | 1.1 (0.9) | 2.0 (0.8) | -0.9 | 11.7 |
| T | 21.6 (4.3) | 25.3 (3.1) | -3.7 | 11.5 |
| TTT(Phe) | 1.3 (1.1) | 2.3 (0.9) | -1.0 | 11.2 |
| Val | 5.1 (2.1) | 6.5 (1.3) | -1.4 | 10.8 |
| Phe | 3.0 (1.7) | 4.1 (0.8) | -1.1 | 10.6 |
| TT | 5.2 (2.3) | 6.9 (1.8) | -1.7 | 10.4 |
| TG | 6.0 (1.8) | 7.1 (1.1) | -1.1 | 10.4 |
| ATT(Ile) | 1.4 (1.1) | 2.2 (0.8) | -0.8 | 10.4 |
| Ile | 4.3 (2.0) | 5.6 (1.3) | -1.3 | 10.3 |
| GTT(Val) | 1.3 (1.0) | 2.0 (0.8) | -0.7 | 10.2 |
| AAT(Asn) | 1.9 (1.3) | 2.7 (1.1) | -0.8 | 10.0 |
| GAT(Asp) | 2.2 (1.5) | 2.9 (1.1) | -0.7 | 8.7 |
| Asp | 4.2 (1.8) | 5.1 (0.8) | -0.9 | 8.5 |
| Asn | 3.9 (1.6) | 4.7 (1.2) | -0.8 | 8.3 |
| GT | 4.5 (1.5) | 5.1 (1.0) | -0.6 | 7.8 |
| AAA(Lys) | 2.4 (1.7) | 3.2 (1.4) | -0.8 | 7.6 |