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. 2020 Apr 2;546:51–66. doi: 10.1016/j.virol.2020.03.007

Table 2.

List of 20 composition features, sorted in accordance to a decreasing z-value, showing a significant depletion in overlapping genes (z-value >4.41; two-tailed P = 10-5; 319 degrees of freedom) with respect to non-overlapping genes.

Composition feature Mean % content in overlapping genes (sd) Mean % content in non-overlapping genes (sd) Mean % difference between overlap and non-overlap z-value
Tyr 2.2 (1.3) 3.6 (0.7) -1.4 12.8
TA 3.6 (1.5) 5.3 (1.8) -1.7 12.6
AT 5.7 (1.9) 7.1 (1.8) -1.4 12.2
Amino acids with low codon degeneracy 36.9 (6.1) 41.2 (3.9) -4.3 12.1
TAT(Tyr) 1.1 (0.9) 2.0 (0.8) -0.9 11.7
T 21.6 (4.3) 25.3 (3.1) -3.7 11.5
TTT(Phe) 1.3 (1.1) 2.3 (0.9) -1.0 11.2
Val 5.1 (2.1) 6.5 (1.3) -1.4 10.8
Phe 3.0 (1.7) 4.1 (0.8) -1.1 10.6
TT 5.2 (2.3) 6.9 (1.8) -1.7 10.4
TG 6.0 (1.8) 7.1 (1.1) -1.1 10.4
ATT(Ile) 1.4 (1.1) 2.2 (0.8) -0.8 10.4
Ile 4.3 (2.0) 5.6 (1.3) -1.3 10.3
GTT(Val) 1.3 (1.0) 2.0 (0.8) -0.7 10.2
AAT(Asn) 1.9 (1.3) 2.7 (1.1) -0.8 10.0
GAT(Asp) 2.2 (1.5) 2.9 (1.1) -0.7 8.7
Asp 4.2 (1.8) 5.1 (0.8) -0.9 8.5
Asn 3.9 (1.6) 4.7 (1.2) -0.8 8.3
GT 4.5 (1.5) 5.1 (1.0) -0.6 7.8
AAA(Lys) 2.4 (1.7) 3.2 (1.4) -0.8 7.6