Table 2.

Nucleotide changes in H. pylori 26695 TF generated by transformation of 26695 with 26695 EZA genomic DNA

Positiona	Type	Reference	Allele	Locus tag	Amino acid substitution	Gene product
1367889	Substitution	C	T	HP_1293	Glu290Lys	RNA polymerase subunit α
1197822	Substitution	C	T	HP_1134	–	ATP synthase subunit α
1198143	Deletion	TC	–	–	–	Ribosome-binding site for HP_1134
1198189	Substitution	T	C	HP_1135	Glu171Lys	ATP synthase subunit δ
1296698	Substitution	T	C	HP_1221	Asn131Asp	UPP pyrophosphate synthase
1548534	Substitution	A	C	HP_1476	Gly60Ala	Flavin prenyltransferase UbiX
835376	Substitution	T	C	HP_0781	Ala92Val	Hypothetical protein
835407	Substitution	A	C		Asp102Glu
835710	Substitution	G	A		Thr201Ala

^aNucleotide positions are indicated with reference to the published H. pylori 26695 genome (GenBank ID: AE000511 [18])