TABLE 1.

Species with the largest number of DE transcripts.

Organism	Complex	% of total up-regulated transcripts
Actinomyces viscosus C505	Blue	∼11%
Actinomyces oral taxon 175	Unaffiliated	∼7%
Parvimonas micra ATCC 33270	Orange	∼7%
Rothia dentocariosa M567	Unaffiliated	∼6%
Rothia dentocariosa ATCC 17931	Unaffiliated	∼5%
Veillonella parvula DSM 2008	Purple	∼5%
Actinomyces oral taxon 171	Unaffiliated	∼3%
Streptococcus constellatus subsp. pharyngis SK1060	Orange	∼3%
Fusobacterium nucleatum subsp. vincentii ATCC 49256	Orange	∼2%
Actinomyces oris K20	Unaffiliated	∼2%

List of top 10 species with the most number of up-regulated transcripts. Includes information of the microbial complexes these organisms belong to.