Table 1.
Primers used for reverse transcription, PCR and sequencing. Primer names generally indicate approximate binding positions in the NoVs genome
Primer | Sequence (5′-3′) | Genome Position (nt) | Amplicon size |
---|---|---|---|
NORP7F | GAAGATGGCGTCTAACGACG | 7–27 | 539 bp |
NORP_546R | TGAGGGACATGCACCACTC | 527–546 | |
NORP_374F | GAACCACTCCCAGGCTCTAT | 374–394 | 876 bp |
NORP_1250R | CCTCCATGTCTAGAACAGCA | 1230–1250 | |
NORP1085F | CGCATGTTCACTTCAGCAGC | 1085–1105 | 951 bp |
NORP2036R | CCCTTYCCATAAGGGGTGTT | 2016–2036 | |
NORP3127F | CTTTTGATYACCACCACTCATGT | 3127–3150 | 1191 bp |
NORP4318R | TCTGTTGGGTGGAGTCCCA | 4299–4318 | |
NORP3819F | GAAACCATAGTGAATTTTCTAG | 3819–3841 | 540 bp |
NORP4359R | CAGCAGAGAATTTCACCATG | 4339–4359 | |
NORP4051F | TGAARGATGARCTTGTSAAGAC | 4051–4073 | 1087 bp |
NORP5138R | TTGACCTCTGGTACGAGACC | 5118–5138 | |
NVG4F | TGGATGCGRTTCTCNGACYT | 5007–5027 | 1821 bp |
NORP5647F | CGAACAATGCTGGGGATGATGTTT | 5647–5671 | |
NORP6828R | TGATTAAKKGCATTRGYACCAGCA | 6804–6828 | |
NORP6579F | CACCACAGGTAGAGTGCTC | 6579–6598 | 1071 bp |
NORP7650R | TTTTTTTGGAGATCAGGGAACAG | 7627–7650 |