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. 2020 Apr 16;21:308. doi: 10.1186/s12864-020-6590-4

Table 8.

Relative amount [%] of significantly differentiated and oppositely fixed loci per functional class and relative abundance of loci in differentiated classes in comparison to all background loci

Relative amount of loci per class Relative abundance compared to background
5% bonf Opp. Fixed 5% bonf Opp. fixed
3_prime_UTR_variant 1.0790 1.1905 0.9906 1.0913
5_prime_UTR_variant 0.2728 0.3345 0.9919 1.2232
coding_sequence_variant 0.0002 0.0000 0.9558 0.0000
downstream_gene_variant 6.4463 7.1600 1.0199 1.1224
intergenic_variant 19.9130 19.4910 0.9892 0.9698
intron_variant 65.4566 64.3371 1.0019 0.9848
missense_variant 0.2416 0.3683 1.0033 1.5229
start_lost 0.0009 0.0000 1.2111 0.0000
stop_gained 0.0020 0.0047 0.9747 2.1566
stop_gained,splice_region_variant 0.0001 0.0000 0.5296 0.0000
stop_gained,start_lost 0.0000 0.0000 5.2287 0.0000
stop_lost 0.0005 0.0000 1.0325 0.0000
synonymous_variant 0.5686 0.4842 1.0205 0.8975
upstream_gene_variant 6.0184 6.6297 0.9945 1.0989