Table 1.

The overall assessment of the sequencing data

Sample_name	Raw_reads	Clean_reads	Raw_bases(G)	Clean_bases(G)	Error rate(%)	Q20(%)	Q30(%)	GC_content(%)
CR_0h_1	102,656,082	102,656,082	15.4	15.4	0.01	98.13	95.03	42.82
CR_30h_1	80,567,758	80,567,758	12.09	12.09	0.02	96.32	91.05	42.29
CR_8h_1	79,478,876	79,478,876	11.92	11.92	0.02	96.41	91.23	42.94
CR_0h_2	97,730,610	97,730,610	14.66	14.66	0.01	97.99	94.69	42.52
CR_30h_2	100,192,938	100,192,938	15.03	15.03	0.01	97.98	94.69	42.44
CR_8h_2	94,324,174	94,324,174	14.15	14.15	0.01	98.1	94.97	42.77
CS_0h_1	95,783,116	95,783,116	14.37	14.37	0.01	97.58	93.81	42.95
CS_30h_1	90,916,088	90,916,088	13.64	13.64	0.02	96.86	92.29	42.84
CS_8h_1	86,534,460	86,534,460	12.98	12.98	0.01	97.79	94.28	42.96
CS_0h_2	103,713,024	103,713,024	15.56	15.56	0.01	98.02	94.78	42.79
CS_30h_2	98,559,578	98,559,578	14.78	14.78	0.01	97.97	94.71	42.39
CS_8h_2	114,298,442	114,298,442	17.14	17.14	0.01	97.89	94.49	43