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. 2007 Feb 23;86(1):83–94. doi: 10.1002/bip.20706

Figure 1.

Figure 1

Alignments used to generate the polymerase domain model of BTV VP1. The alignment of BTV VP1 polymerase domain with poliovirus RdRp (A) or with RHDV RdRp (B). Pairwise alignments derived from the original alignment of all three sequences are shown for clarity. Identical residues are on a red background, and similar residues are in red font. Similarity was defined using ESPript 2.2,22 with a similarity score of 0.8 and using physicochemical properties of side chains as the criteria for similarity. Motif A is indicated with asterisks. Motif C is underlined.