Table 1.
sample set | fractionation method | number of fractions | MS/MS analysis | number of runs per set |
---|---|---|---|---|
sets 1–5 | Pierce high-pH reversed-phase peptide fractionation kit | 9 | LC-MS/MS | 9 |
sets 6–7 | low-pH nano-RPLC | 11 | CZE-MS/MS | 11 |
17 | LC-MS/MS | 17 | ||
sets 8–13 | Pierce high-pH reversed-phase peptide fractionation kit | 10 | LC-MS/MS | 10 |