Table 3.
Summary of the most significant extracellular metabolites differentiating between media of SW48 cells with KRAS mutations in codons 12 and 13 and media of their wild type counterpart
| Metabolite (HMDB no) | 1H NMR chemical shift in ppm and multi-plicity | G13D/+ vs +/+ | G12S/+ vs +/+ | G12A/+ vs +/+ | G12C/+ vs +/+ | G12D/+ vs +/+ | G12V/+ vs +/+ | G12R/+ vs +/+ |
|---|---|---|---|---|---|---|---|---|
| 3-methyl-2-oxo-valeric acid (00491) | 0.897 (t), 1.102 (d) | ↓ | – | – | ↑ | – | ↓ | ↑ |
| keto-leucine (00695) | 0.94(d), 2.617(d) | ↓ | – | ↓ | – | – | ↓ | – |
| Isoleucine (00172) | 0.943 (t), 1.01 (d), 3.675 (d) | – | – | – | ↓ | – | – | ↓ |
| Leucine (00687) | 0.961 (d), 0.972 (d), 1.691 (m), 1.720 (m), 1.748 (m), 3.737 (dd) | – | – | – | ↓ | – | – | ↓ |
| Valine (00883) | 0.996 (d), 1.046 (d), 3.615 (d) | – | – | – | ↓ | – | – | ↓ |
| 2-Oxo-isovaleric acid (00019) | 1.126 (d) | ↓ | – | – | – | – | ↓ | ↑ |
| Lactate (00190) | 1.331 (d), 4.113 (q) | ↓ | ↓ | ↑ | ↑ | – | ↑ | ↑ |
| Threonine (00167) | 1.335 (d), 3.591 (d) | ↓ | – | – | – | – | – | – |
| Alanine (00161) | 1.48 (d), 3.787 (q) | – | ↓ | – | – | ↑ | ↑ | – |
| l-Alanyl-l-glutamine (0028685) | 1.546 (d), 1.98 (m), 2.35 (t), 4.182 | ↓ | ↑ | ↓ | – | ↓ | ↓ | ↓ |
| Acetate (00042) | 1.919 (s) | ↑ | ↑ | ↑ | ↓ | – | – | ↓ |
| Glutamate (00148) | 2.059 (m), 2.140 (m), 2.355 (m), 3.761 (dd) | ↑ | – | – | – | – | ↑ | ↑ |
| Glutamine (00641) | 2.145 (m), 2.46 (m), 3.783 (t) | – | ↓ | – | – | ↑ | – | – |
| Methionine (0000696) | 2.1 (s), 2.65 (t) | ↓ | ↓ | ↓ | ↓ | – | ↓ | ↓ |
| Pyruvate (0000243) | 2.379 (s) | – | – | – | – | ↑ | ↑ | – |
| Aspartate (00191) | 2.684 (dd), 2.816 (dd), 3.902 (dd) | – | – | – | – | – | – | ↓ |
| Glucose (00122) | 4.65 (d),5.2 (d) | – | – | ↓ | ↓ | – | ↓ | ↓ |
| Histidine (00177) | 7.115 (d), 7.922 (d) | – | – | – | – | – | – | ↓ |
| Tyrosine (0000158) | 6.91 (m),7.20 (m) | – | – | – | – | – | – | ↓ |
| Phenyl-alanine (0000159) | 7.34 (d), 7.381 (m), 7.43 (m) | ↓ | – | – | ↓ | – | ↓ | ↓ |
| Tryptophan (0000929) | 7.55 (d), 7.75 (d), 7.29 (s) | ↓ | – | ↓ | ↓ | – | – | ↓ |
| Formate (0000142) | 8.461 (s) | – | – | – | – | – | ↓ | ↓ |