Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2020 Apr 16;10:6510. doi: 10.1038/s41598-020-63536-0

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2020

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

PMC Copyright notice

Dynamic starch and TF subnetworks in cold stressed condition. (a) starch subnetwork was classified into five functional groups; (1) phosphoglucomutase (PGM), (2) glucose-1-phosphate adenylyltransferase (AGPase), (3) starch synthase (SS), (4) 1,4 –alpha-glucan branching enzyme (SBE) and (5) 1,4 –alpha-glucan debranching enzyme (DBE). The red circle represents Manes.02G001000.2.p (GBSS2) protein that showed different interactions relative to control. (b) TFs related to the starch protein subnetwork were separated in 7 groups; (1) ethylene response factor proteins (ERF), (2) Myb domain proteins (MYB), (3) basic helix-loop-helix (bHLH) DNA-binding proteins, (4) NAC domain containing proteins, (5) basic-leucine zipper (bZIP) transcription factor proteins (6) homeobox proteins and (7) other TF proteins. The nodes represent starch (circle) and transcription factor (square) proteins, while the edges show the interactions. The node colors show percentile expression of proteins from highest (dark blue) to lowest (light blue), while the edge colors represent PPIs from both interolog and DDI based predictions (black), or either (grey). The alphabet in orange boxes denote the following TFs proteins; (A) ERF transcription factor protein (ERF; Manes.16G034200.1.p), (B) Myb domain protein 30 (Myb30;Manes.02G046100.1.p), (C) bHLH DNA binding protein (bHLH; Manes.01G269700.1.p), (D) NAC containing protein (NAC;Manes.06G015000.1.p), (E) NIN-like protein 5 (NIN5; Manes.05G130800.2.p), (F) OBF binding protein 4 (OBF4; Manes.06G080600.1.p) and Myb domain protein 96 (Myb96; Manes.06G092600.1.p).