Table 5.

Comparison on real data with two batches as discovery and one batch as validation. TPM ≥ 1 is applied to the single-cell results.

Methods	DECount	TPCount	Precision	Recall	F1 Score
batch_scran	10,090	7711	0.764	0.788	0.776
pseudo_bulk	403	378	0.938	0.039	0.074
CorrConf_scran	3260	2320	0.712	0.237	0.356
cate_scran	7843	5604	0.715	0.573	0.636
dSVA_scran	3139	2430	0.774	0.248	0.376
SVA_scran	9904	7432	0.750	0.759	0.755

# of DE genes in validation set: 9788.