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. 2019 Oct 21;69(3):479–501. doi: 10.1093/sysbio/syz068

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© The Author(s) 2019. Published by Oxford University Press on behalf of the Society of Systematic Biologists.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

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Figure 5. — Infinite-sites plots showing the estimated posterior mean times in Ma (-axis) plotted against the estimated posterior confidence interval (CI) widths in Ma (-axis) for the AR model for both data sets (all data, 10 genes SortaDate) using the three different partition schemes, three partitions (a, a’), six partitions (b, b’), and 10 partitions (c, c’). The solid line represents the regression line including the root and the dotted line represents the regression line excluding the root. is the coefficient of determination for each comparison, whereas below each are the equations of the regression lines with and without the root.

Inline graphic — Infinite-sites plots showing the estimated posterior mean times in Ma (-axis) plotted against the estimated posterior confidence interval (CI) widths in Ma (-axis) for the AR model for both data sets (all data, 10 genes SortaDate) using the three different partition schemes, three partitions (a, a’), six partitions (b, b’), and 10 partitions (c, c’). The solid line represents the regression line including the root and the dotted line represents the regression line excluding the root. is the coefficient of determination for each comparison, whereas below each are the equations of the regression lines with and without the root.