Table 2. Number of DAS events in mpk3, mpk4, mpk6, summ2 and summ2mpk4 as compared to Col-0 upon mock (H2O) or flg22 treatment.
Number of DAS events (Pval cutoff 0.0001 / FDR 0.05) | |||||
---|---|---|---|---|---|
Comparisons vs Col-0 | Skipped exon | Mutually exclusive exon | Alternative 5' splice site | Alternative 3' splice site | Retained intron |
mpk3 (flg22) | 0 | 0 | 0 | 3 | 8 |
mpk3 (mock) | 0 | 0 | 2 | 0 | 10 |
mpk4 (flg22) | 6 | 3 | 28 | 30 | 297 |
mpk4 (mock) | 3 | 0 | 1 | 13 | 45 |
mpk6 (flg22) | 7 | 0 | 2 | 0 | 5 |
mpk6 (mock) summ2 (flg22) summ2 (mock) mpk4summ2 (flg22) |
0 41 46 41 |
0 2 2 1 |
0 130 113 131 |
0 117 142 147 |
10 416 492 562 |
mpk4 summ2 (mock) | 49 | 1 | 71 | 113 | 434 |