Table 1.
Bovine torovirus | Bovine coronavirus | Rotavirus | |
---|---|---|---|
Amplification product | 741 bp | 407 bp | 433 bp |
Upstream primer | 5′‐GTG TTA AGT TTG TGC AAA AAT G‐3′ | 5′‐GCC GAT CAG TCC GAC CAA TC‐3′ | 5′‐AAG TAG CTG GAT TTG ATT ATT C‐3′ |
Downstream primer | 5′‐TGC ATG AAC TCT ATA TGG TGT‐3′ | 5′‐AGA ATG TCA GCC GGG GTA T‐3′ | 5′‐GAC TCA CAA ACT GCA GAT TCA A‐3′ |
Volume template | 2.5 μl | 1.6 μl | 1.5 μl |
Volume RT‐PCR mixture | 22.5 μl | 18.4 μl | 13.5 μl |
Reverse transcription | 50°C, 30 min | 50°C, 30 min | 50°C, 30 min |
Initial denaturation | 95°C, 15 min | 95°C, 15 min | 95°C, 15 min |
Number of cycles | 35 | 35 | 40 |
Temperature profile | 95°C, 1 min | 94°C, 30 s | 94°C, 1 min |
55°C, 1.5 min | 58°C, 1 min | 55°C, 1 min | |
72°C, 1.5 min | 72°C, 2 min | 72°C, 1 min | |
Final extension | 72°C, 10 min | 72°C, 10 min | 72°C, 7 min |