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. 2006 Apr 19;53(4):160–165. doi: 10.1111/j.1439-0450.2006.00936.x

Table 1.

 Details of reverse transcriptase‐polymerase chain reactions (RT‐PCRs) for the detection of bovine torovirus‐, bovine coronavirus‐ and rotavirus‐specific nucleic acids

Bovine torovirus Bovine coronavirus Rotavirus
Amplification product 741 bp 407 bp 433 bp
Upstream primer 5′‐GTG TTA AGT TTG TGC AAA AAT G‐3′ 5′‐GCC GAT CAG TCC GAC CAA TC‐3′ 5′‐AAG TAG CTG GAT TTG ATT ATT C‐3′
Downstream primer 5′‐TGC ATG AAC TCT ATA TGG TGT‐3′ 5′‐AGA ATG TCA GCC GGG GTA T‐3′ 5′‐GAC TCA CAA ACT GCA GAT TCA A‐3′
Volume template 2.5 μl 1.6 μl 1.5 μl
Volume RT‐PCR mixture 22.5 μl 18.4 μl 13.5 μl
Reverse transcription 50°C, 30 min 50°C, 30 min 50°C, 30 min
Initial denaturation 95°C, 15 min 95°C, 15 min 95°C, 15 min
Number of cycles 35 35 40
Temperature profile 95°C, 1 min 94°C, 30 s 94°C, 1 min
55°C, 1.5 min 58°C, 1 min 55°C, 1 min
72°C, 1.5 min 72°C, 2 min 72°C, 1 min
Final extension 72°C, 10 min 72°C, 10 min 72°C, 7 min