Table II.
Microbiological Findings Obtained at Exacerbation of Chronic Obstructive Pulmonary Disease A Global Findings Obtained Using Classical Culture Techniques for Bacteria and Viruses Associated to Multiplex Polymerase Chain Reaction (PCR) Assays for the Detection of Viral and Atypical Bacterial Pathogens in Sputum Specimens
Number of samples positive bya | ||||
---|---|---|---|---|
PCR microarray techniques | Culture assays | |||
n | % | n | % | |
Respiratory virusesb | 20 | 44 | 3 | 6 |
HRV | 9 | 20 | 0 | 0 |
HMPV | 8 | 18 | 0 | 0 |
Influenza A virus | 2 | 4 | 1 | 2 |
Influenza B virus | 1 | 2 | 0 | 0 |
RSV | 1 | 2 | 1 | 2 |
Parainfluenza virus | 1 | 2 | 1 | 2 |
Respiratory bacteria | 19 | 42 | ||
Classical PPM | ||||
Moraxella catarrhalis | ND | ND | 6 | 13 |
Haemophilus influenzae | ND | ND | 8 | 17 |
Streptococcus pneumoniae | ND | ND | 3 | 7 |
Streptococcus species | ND | ND | 1 | 2 |
Pasteurella multocida | ND | ND | ND | 2 |
Citrobacter freundii | ND | ND | ND | 2 |
Haemophilus parainfluenzae | ND | ND | 1 | 2 |
Proteus vulgaris | ND | ND | 1 | 2 |
Atypical respiratory pathogens | ||||
Legionella pneumophila | 0 | 0 | ||
Mycoplasma pneumoniae | 0 | 0 | ||
Chlamydia pneumoniae | 0 | 0 |
B‐Viral and bacterial co‐infections at exacerbation of chronic obstructive pulmonary disease | ||
---|---|---|
Coinfections | n = 12 | |
Pathogen 1 | Pathogen 2 | |
HMPV | 6 | |
Influenza A virus | 1 | |
HRV | 1 | |
H. influenzae | 1 | |
M. catarrhalis | 1 | |
S. pneumoniae | 1 | |
H. parainfluenzae | 1 | |
HRV | 6 | |
HMPV | 1 | |
H. influenzae | 4 | |
M. catarrhalis | 1 | |
RSV | H. influenzae | 1 |
More than one pathogen possible.
Twenty viral pathogens were detected by microarray system; only positive detected viral types were notified in this table.