Table 2.
Alphavirus test isolates and their expected/observed base compositions.ab
Virus | Strain | Sequence available | Expected base composition | Observed base composition |
---|---|---|---|---|
VEE | 3908 (subtype IC, 1995) | Yes | [21 23 23 19] | [21 23 23 19] |
VEE | 66637 (subtype ID, 1981) | Yes | [21 23 23 19] | [21 23 23 19] |
VEE | 68U201 (subtype IE, 1968) | Yes | [22 25 19 20] | [22 25 19 20] |
VEE | 243937 (subtype IC, 1992) | Yes | [21 23 23 19] | [21 23 23 19] |
WEE | OR71 (71V1658) | Yes | [22 26 19 19] | [22 26 19 19] |
WEE | SD83 (R‐43738) | No | Unknown | [22 26 19 19] |
WEE | ON41 (McMillan) | No | Unknown | [22 27 18 19] |
WEE | Fleming (Fleming) | No | Unknown | [22 25 19 20] |
EEE | (Parker strain) | Yes | [23 25 19 19] | [23 25 19 19] |
aThree of the WEE isolates shown in grey represent de novo measurements.
bAll isolates were obtained from Dr. Scott Weaver, UTHSC, Galveston, TX.