Table 6.
Gene | Initial Denaturation | Denaturation | Annealing | Extension | Number of Cycles | Final Extension | |
---|---|---|---|---|---|---|---|
Species-specific | phoA | 94 °C 5 min |
94 °C 30 s |
58 °C 45 s |
72 °C 45 s |
35 | 72 °C 10 min |
Virulence | Iss | 94 °C 5 min |
94 °C 30 s |
58 °C 45 s |
72 °C 45 s |
35 | 72 °C 10 min |
fimH | 95 °C 2 min |
94 °C 30 s |
58 °C 30 s |
72 °C 1 min |
33 | 72 °C 7 min |
|
iutA | 94 °C 3 min |
94 °C 1 min |
55 °C 1 min |
72 °C 30 s |
30 | 72 °C 7 min |