Table 1.
Polymorphisms identified from LEI0258 alleles.
| Consensus (bp) | sample ID | Susceptibility | Upstream | R13 | R12 | Downstream | |||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| −32–31 | −30 | −12 | −2 | 3 | 21–28 | 31 | 37 | 44 | |||||
| TT/Δ | G/A | G/A | C/T | C/T | ATTTTGAG/Δ | Δ/A | A/T | T/A | |||||
| 194 | K39 | H | — | — | A | — | 1 | 3 | — | Δ | A | — | — |
| 194 | K7 | L | — | — | A | — | 1 | 3 | — | Δ | A | — | — |
| 194 | K60 | L | — | — | A | — | 1 | 3 | — | Δ | A | — | — |
| 194 | K84 | H | — | — | A | — | 1 | 3 | — | Δ | A | — | — |
| 194 | K121 | H | — | — | A | — | 1 | 3 | — | Δ | A | — | — |
| 205 | L48 | H | — | — | — | — | 1 | 4 | — | Δ | — | — | — |
| 205 | S6 | H | — | — | — | — | 1 | 4 | — | Δ | — | — | — |
| 205 | S61 | L | — | — | — | — | 1 | 4 | — | Δ | — | — | — |
| 205 | S65 | H | — | — | — | — | 1 | 4 | — | Δ | — | — | — |
| 205 | S92 | H | — | — | — | — | 1 | 4 | T | Δ | — | — | — |
| 205 | L35 | L | — | — | — | — | 1 | 4 | — | Δ | — | — | — |
| 205 | S52 | L | — | — | — | — | 1 | 4 | — | Δ | — | — | — |
| 205 | S68 | H | — | — | — | — | 1 | 4 | — | Δ | — | — | — |
| 205 | L19 | H | — | — | — | — | 1 | 4 | — | — | — | — | — |
| 194 | K27 | H | — | — | A | — | 1 | 3 | — | Δ | A | — | — |
| 217 | K75 | H | — | — | — | — | 1 | 5 | — | Δ | — | — | — |
| 217 | K129 | L | — | — | — | — | 1 | 5 | — | Δ | — | — | — |
| 217 | L6 | H | — | — | — | — | 1 | 5 | — | Δ | — | — | — |
| 217 | L12 | L | — | — | — | — | 1 | 5 | — | Δ | — | — | — |
| 217 | L23 | H | — | — | — | — | 1 | 5 | — | Δ | — | — | — |
| 217 | L59 | L | — | — | — | — | 1 | 5 | — | Δ | — | — | — |
| 217 | K112 | H | — | — | — | — | 1 | 5 | — | — | — | — | — |
| 241 | S24 | H | — | — | — | — | 1 | 7 | — | Δ | — | — | — |
| 241 | S84 | H | — | — | — | — | 1 | 7 | — | Δ | — | — | — |
| 249 | K34 | L | — | — | — | — | 1 | 7 | — | — | — | — | A |
| 249 | S7 | L | — | — | — | — | 1 | 7 | — | — | — | — | A |
| 249 | S46 | L | — | — | — | — | 1 | 7 | — | — | — | — | A |
| 249 | S88 | L | — | — | — | — | 1 | 7 | — | — | — | — | A |
| 249 | K56 | L | — | — | — | — | 1 | 7 | — | — | — | — | A |
| 205 | S31 | H | — | — | — | — | 1 | 4 | T | Δ | — | — | — |
| 261 | S34 | L | — | — | — | — | 1 | 8 | — | — | — | — | — |
| 205 | S47 | L | — | — | — | — | 1 | 4 | — | Δ | — | — | — |
| 261 | L4 | L | — | — | — | — | 1 | 8 | — | — | — | — | A |
| 261 | L10 | H | — | — | — | — | 1 | 8 | — | — | — | — | A |
| 261 | L24 | L | — | — | — | — | 1 | 8 | — | Δ | — | — | A |
| 261 | L16 | L | — | — | — | — | 1 | 8 | — | — | — | — | A |
| 261 | S69 | H | — | — | — | — | 1 | 8 | — | — | — | — | A |
| 261 | K48 | H | — | — | — | — | 1 | 8 | — | — | — | — | A |
| 261 | L5 | H | — | — | — | — | 1 | 8 | — | — | — | — | A |
| 261 | L103 | H | — | — | — | — | 1 | 8 | — | — | — | — | A |
| 261 | S76 | L | — | — | — | — | 1 | 8 | — | — | — | — | — |
| 217 | K16 | H | — | — | — | — | 1 | 5 | — | Δ | — | — | — |
| 261 | L41 | L | — | — | — | — | 1 | 8 | — | — | A | A | |
| 261 | LT2 | H | — | — | — | — | 1 | 8 | — | — | — | — | A |
| 261 | K57 | L | — | — | — | — | 1 | 8 | — | — | — | — | A |
| 261 | L95 | L | — | — | — | — | 1 | 8 | — | — | — | — | A |
| 205 | S40 | L | — | — | — | T | 1 | 4 | T | Δ | — | — | |
| 273 | K59 | H | — | — | — | — | 1 | 9 | — | — | — | — | A |
| 217 | K22 | L | — | — | — | — | 1 | 5 | — | Δ | — | — | — |
| 194 | K42 | H | — | — | A | — | 1 | 3 | — | Δ | A | — | — |
| 273 | K103 | L | — | — | — | — | 1 | 9 | — | — | — | — | A |
| 261 | K110 | L | — | — | — | — | 1 | 8 | — | — | — | — | A |
| 295 | L63 | L | Δ | — | — | — | 1 | 11 | — | — | — | — | — |
| 307 | K89 | H | Δ | A | — | — | 1 | 12 | — | — | — | — | — |
| 307 | L51 | H | Δ | A | — | — | 1 | 12 | — | — | — | — | — |
| 307 | L75 | H | — | — | — | — | 1 | 12 | — | — | — | — | — |
| 307 | L110 | H | Δ | A | — | — | 1 | 12 | — | — | — | — | — |
| 194 | K1 | L | — | — | A | — | 1 | 3 | — | Δ | A | — | — |
| 307 | K80 | L | Δ | A | — | — | 1 | 12 | — | — | — | — | — |
| 307 | L52 | H | Δ | A | — | — | 1 | 12 | — | — | — | — | — |
| 309 | L68 | H | — | — | — | — | 1 | 12 | — | — | — | T | — |
| 309 | K24 | L | — | — | — | — | 1 | 12 | — | — | — | T | — |
| 309 | K50 | L | — | — | — | — | 1 | 12 | — | — | — | T | — |
| 309 | K119 | H | — | — | — | — | 1 | 12 | — | — | — | T | — |
| 309 | K126 | H | — | — | — | — | 1 | 12 | — | — | — | T | — |
| 309 | K102 | L | — | — | — | — | 1 | 12 | — | — | — | T | — |
| 273 | K14 | L | — | — | — | T | 1 | 9 | — | — | — | — | A |
| 317 | K55 | L | — | — | — | — | 1 | 9 | — | — | — | — | — |
| 273 | L3 | H | — | — | — | — | 1 | 9 | — | — | — | — | — |
| 217 | L39 | L | — | — | — | T | 1 | 5 | — | Δ | — | — | — |
| 452 | S59 | H | — | — | — | — | 4 | 5 | — | — | — | — | — |
| 307 | L104 | H | Δ | A | — | — | 1 | 12 | — | — | — | — | — |
| 205 | LS4 | H | — | — | — | — | 1 | 4 | T | Δ | — | — | — |
| 312 | L84 | H | — | — | — | — | 1 | 9 | — | — | — | — | — |
| 312 | L38 | L | — | — | — | — | 1 | 9 | — | — | — | — | — |
Δ: defines deletion compared with the reference sequence. –: consistent with the reference sequence.