Table 1.
Author, Year, Reference | Country | Design | Size | Age | Sample Type | Type of RTI | Lab Method | Pathogen |
---|---|---|---|---|---|---|---|---|
Ahn 201424 | Korea | OP | 1528 | ≤18 years | NPA | ARI | PCR | HBoV‐1 |
Akhras 201025 | USA | OR | 256 | <18 years | NPS | ARI | DFA, culture, PCR | RSV, HMPV |
Ali 201026 | Jordan | OP | 728 | <5 years | NS, TS | ARI | PCR | HMPV |
Annamalay 201627 | Mozambique | OP | 277 | ≤10 years | NPA | RTI | PCR | HRV |
Bhandary 201628 | India | CS | 100 | ≤5 years | NPA | RTI | DFA | RSV |
Broor 201429 | USA | OP | 245 | <5 years | NS, TS | ARI | PCR | Flu A/B, RSV |
Bryant 201030 | Australia | OP | 446 | ≤16 years | NPA, NS, TS | ILI | DFA, PCR | Flu A |
Carballal 200231 | Argentina | OR | 168 | <2 years | NPA | Acute LRTI | IFA, culture | HAdV |
Chang 201232 | USA | OP and CC | 5066 | ≤18 years | NS | ILI | PCR | Flu A |
Chano 200533 | Canada | CC | 1132 | ≤18 years | NPA, BAL, ETA | RTI | DFA, culture, EIA, PCR | HMPV |
Chen 201034 | China | OP | 6296 | ≤18 years | NPA | Acute LRTI | PCR | RSV, HMPV |
Cuevas 200335 | Brazil | OP | 111 | <3 years | NS | Acute LRTI | PCR | RSV, HMPV |
Esposito 201636 | Italy | OP | 307 | ≤18 years | NS | RTI | PCR | HAdV |
Fairchok 201037 | USA | Cohort | 318 | ≤30 months | NS | RTI | PCR | Flu A |
Farng 200238 | China | OR | 48 | ≤18 years | TS, serum | PNA | IFA | HAdV |
Fischer Langley 201339 | Guatemala | OP | 2413 | <5 years | NPS, OPS | ARI | PCR | RSV |
Flores 200440 | Portugal | OP | 225 | <3 years | NS | Acute BCL | PCR | RSV |
Giamberardin 201641 | Brazil | CS | 250 | 24‐59 months | NS, OPS | RTI, asthma | PCR | Flu A/B, HRV, HAdV, HPIV, HCoV |
Halasa 201542 | Jordan | OP | 3173 | <2 years | NS, TS | RTI, others | PCR | RSV |
Hite 200743 | UK | CC | 411 | ≤18 years | NS | ILI | RT, culture | Flu A/B |
Hombrouck 201244 | Belgium | OP | 139 | <5 years | NPS, TS | ILI | PCR | Flu A, RSV, HRV, HMPV, HPIV |
Hsieh 201445 | China | OP | 1062 | ≤18 years | Serum | Flu season | Ab | Flu A |
Huai 201746 | China | OP | 14479 | <15 years | NS | SARI | PCR | Flu A/B |
Jevsnik 201247 | Slovenia | OP | 741 | <6 years | NPS, TS, TA, BAL, sputum | ARI | PCR | HCoV |
Jin 201048 | China | OP | 645 | <16 years | NPA | ARI | PCR | HCoV |
Khamis 2012 49 | Oman | OP | 259 | ≤5 years | RS | RTI | PCR | RSV |
Kuo 201150 | China | CC | 308 | ≤18 years | NPS, TS | ILI | RT, PCR | Flu A |
Lamarao 201251 | Brazil | CS | 1214 | ≤18 years | NPS | CAP | DFA, PCR | RSV |
Landa‐Cardena 201252 | Mexico | CS | 124 | <6 years | NS | RTI | PCR | HRV |
Leung 200953 | China | OP and OR | 1981 | <18 years | NPA | ARI | IFA, PCR | HCoV |
Martin 201554 | Canada | OP | 219 | ≤2 years | Oral fluid | HHP‐6 history | PCR | HBoV‐1 |
Moreno‐Valencia 201555 | Mexico | OP | 432 | <12 years | NPS | ARI | PCR | Flu A, RSV, HRV, HMPV, HPIV, HAdV |
Nitsch‐Osuch 201356 | Poland | OP | 59 | ≤59 months | NS, PS | ILI | RT, PCR | Flu A/B |
Nokes 200957 | Kenya | OP | 6026 | 1 day‐59 months | NS | PNA | DFA | RSV |
Nyawanda 201658 | Kenya | OP | 4714 | <5 years | NPS, OPS | ARI | PCR | RSV |
Pecchini 200859 | Brazil | OP | 455 | <5 years | NPS | Acute LRTI | IFA | RSV |
Pierangeli 201260 | Italy | OP | 231 | ≤16 years | PS, nasal washing | ILI | PCR | Flu A, RSV, HRV |
Ramagopal 201661 | India | OP | 80 | 1 month‐3 years | NPS | BCL | PCR | RSV |
Saha 201062 | India | OP | 69 | 10 months‐12 years | NS, TS | Acute FRI | PCR | Flu A |
Schuster 201563 | Jordan | OP | 3175 | <2 years | NS, TS | TRI, AE, CF, FS | PCR | HMPV |
Smit 201264 | Netherlands | OP | 423 | ≤17 years | OPS, NW | ILI | PCR | Flu A |
Smuts 201165 | South Africa | OP | 220 | 2 months‐5 years | NS | Cough, DB, wheezing | PCR | HRV |
Tresoldi 201166 | Brazil | Cohort | 61 | ≤18 years | NPS, PS | ILI | PCR | Flu A |
von Linstow 200467 | Denmark | OP | 374 | ≤2 years | NPS | TRI | IFA, EIFA, PCR | RSV, HMPV |
Weigl 200368 | Germany | CC | 1316 | ≤2 years | NPA | LRTI | PCR | RSV |
Yan 201769 | China | OP | 387 | 8 days‐15 years | NPA | Acute LRTI | PCR | RSV, HMPV |
Zimmerman 201470 | USA | CC | 662 | <2 years | NS, OPS | URTI | PCR | Flu A/B, RSV, HRV, HMPV, HCoV |
Ab, antibody; AE, asthma exacerbation; ARI, acute respiratory infection; BALF, bronchoalveolar lavage fluids; BCL, bronchiolitis; CAP, community‐acquired pneumonia; CC, case‐control; CF, cystic fibrosis; CS, cross‐sectional; DB, difficulty breathing; DFA, direct immunofluorescence assay; EIA, enzyme immunoassay; EIFA, enzyme immunofluorescence assay; ETA, endotracheal aspirates; Flu, influenza; FS, febrile seizure; FRI, febrile respiratory illness; HHP‐6, human herpesvirus 6; IFA, (indirect) immunofluorescence assay; ILI, influenza‐like illness; LRTI, lower respiratory tract infection; NPA, nasopharyngeal aspirate; NPS, nasopharyngeal swab; NS, nasal swabs/secretions; NW, nasal washing; OP, observational prospective; OPS, oropharyngeal swabs; OR, observational retrospective; PC, prospective cohort; PNA, pneumonia; PS, pharyngeal swabs; RS, respiratory samples; SARI, severe acute respiratory infection; RT, rapid test; RTI, respiratory tract infection; TA, tracheal aspirates; TS, throat swabs; URTI, upper respiratory tract infection.