Table 2.
Sources of used datasets. Accession numbers for raw data used to assemble maxicircle sequences in this study. All accessions numbers are for the PacBio reads, if not specified otherwise.
| Species (Strain) | BioProject | Run Accession Number |
|---|---|---|
| Leishmania (L.) mexicana (215-49) | PRJNA484340 | SRR7867272, SRR7867273, SRR7867284,SRR7867285 |
| Leishmania guyanensis (204-365) | SRR7867261, SRR7867262, SRR7867269-SRR7867271 |
|
| Leishmania (L.) aethiopica (209-622) | SRR8377733, SRR7867274, SRR7867278-SRR7867281 |
|
| Leishmania (L.) infantum (193-S1775) | SRR7867264-SRR7867268 | |
| Leishmania (L.) tropica (216-162) | SRR7867286-SRR7867292 | |
| Leishmania (L.) amazonensis (210-660) | SRR7867275-SRR7867277, SRR8377732 | |
| Leishmania (V.) braziliensis (208-905) | SRR7880312; SRR7880319; SRR7880320 | |
| Leishmania (V.) braziliensis (208-954) | SRR7880309-SRR7880311 | |
| Leishmania (L.) donovani (193-S616) | SRR7880313, SRR7880314, SRR7880316 | |
| Leishmania donovani (1S line, FDAARGOS_361) | PRJNA231221 | SRR5932752-SRR5932754, SRR5932751 (Illumina, paired-end) |
| Leishmania donovani (1S2D line, Pasteur) 2 | PRJNA396645 | SRR5902665-SRR5902672 |
| Trypanosoma brucei (Lister 427) | PRJEB18945 | ERR1794935-ERR1794915 |
| Trypanosoma cruzi (TCC) | PRJNA432753 | SRR6822075 |
| Trypanosoma cruzi (Dm28c) | PRJNA433042 | SRR6809376 |
| Leptomonas pyrrhocoris (H10) | PRJNA598933 1 | |
| Herpetomonas megaseliae | PRJEB7883 | ERR1036240-ERR1036242, ERR1046607-ERR1046611 |
| Crithidia expoeki (BJ08_175) | Assembled sequence 3 |