TABLE 2.
List of QTL-associated markers and outliers located in suggestive high-GD and low-GD regions for the broodstock and wild populations.
| Population | Category | Chrom | ID | Position (bp) | Associated traits/Selection signatures |
| Broodstock | High-GD | C05 | Sma-USC277[5] | 16721340 | Resistance and Survival time to Philasterides dicentrarchi; Resistance to Aeromonas salmonicida |
| C06 | 4559_39[2] | 1109461 | Genetic divergence between farm (origin ORI1) and wild turbot | ||
| C08 | 11910[1] | 833346 | Balancing selection; Global outlier | ||
| C08 | Sma-E99[1,10] | 1047506 | Divergent selection | ||
| C09 | Sma-USC266[8] | 23265541 | Growth | ||
| Low-GD | C02 | Sma-USC223[7,8] | 18889875 | Growth (Body weight and Body length) | |
| C02 | Sma-USC50[7,8] | 19267847 | Growth (Body weight and Body length) | ||
| C02 | Sma-E183[8] | 19293723 | Growth (Body weight) | ||
| C02 | 7415_42[1] | 18430391 | Balancing selection; Divergence Baltic Sea and Black Sea vs. Atlantic turbot | ||
| C12 | Sma-USC88[6] | 16323329 | Survival time to VHSV | ||
| C19 | SmaSNP_298[1,10] | 13228742 | Divergent selection | ||
| C22 | 12273_75[2] | 8140606 | Genetic divergence between farm (origin ORI1) and wild turbot | ||
| Wild | High-GD | C01 | 1412_35[2] | 25668281 | Genetic divergence between farm (origin ORI2) and wild turbot |
| C08 | Sma-E99[1,10] | 1047506 | Divergent selection | ||
| C08 | SmaUSC-E23[4,5] | 9946986 | Resistance and Survival time to Philasterides dicentrarchi; Resistance to Aeromonas salmonicida | ||
| C10 | FAR2[3] | 23144173 | Positional gene marker; growth QTL | ||
| Low-GD | C05 | 13637_50[2] | 27533562 | Genetic divergence between farm (origin ORI1) and wild turbot | |
| C05 | PKM[3] | 19976976 | Positional gene marker; growth QTL | ||
| C19 | Sma-USC16[8] | 9911085 | Growth (Body weight, Body length and condition factor) | ||
| C20 | Sma-USC38[1,5,9] | 10007284 | Stabilizing selection; Resistance and Survival time to Philasterides dicentrarchi |
Information about the marker ID, genetic diversity (GD) region they are found in (High-GD, ZHp > 2.5; low-GD, ZHp < −2.5), position in the chromosome and traits they are associated with are presented. Markers in bold were found in selected high-/low-GD regions (ZHp > 3.0; ZHp < −3.0). Sma-E99 (underlined) was detected in both populations in a high-GD region. [1] do Prado et al. (2018a); [2] do Prado et al. (2018b); [3] Robledo et al. (2016); [4] Rodríguez-Ramilo et al. (2011); [5] Rodríguez-Ramilo et al. (2013); [6] Rodríguez-Ramilo et al. (2014); [7] Sánchez-Molano et al. (2011); [8] Sciara et al. (2018); [9] Vilas et al. (2010); [10] Vilas et al. (2015).