Table 2.
Comparison of clinical characteristics of present series of individuals with RAD21 variants with sufficient clinical data (cohort A) with those in individuals with SMC1A and NIPBL variants
[adapted from (Huisman et al. 2017)]
Clinical characteristicsa | HPO ID | RAD21 (n = 29) | SMC1A (n = 51) | NIPBL (n = 67) | |||
---|---|---|---|---|---|---|---|
N pos/N total | Percentage | N pos/N total | Percentage | N pos/N total | Percentage | ||
Sex (male/female) | 15/14 | 52/48 | 14/37 | 27/73 | 34/33 | 51/49 | |
Familial mutation | 5/12 | 42 | 4/47 | 9 | n/a | n/a | |
Length at birth < − 2SD | HP:0003561 | 2/18 | 22 | 9/31 | 28 | 32/43 | 74 |
Weight at birth < − 2SD | HP:0001511 | 4/22 | 18 | 11/41 | 27 | 29/43 | 67 |
Prenatal head circumference < − 2SD | HP:0000252 | 7/16 | 44 | 8/24 | 33 | 39/43 | 91 |
Postnatal height < − 2SD | HP:0008897 | 10/27 | 37 | 24/38 | 63 | 37/43 | 86 |
Postnatal weight < − 2SD | HP:0004325 | 3/26 | 12 | 14/37 | 38 | 39/43 | 91 |
Postnatal head circumference < − 2SD | HP:0000252 | 16/28 | 57 | 23/36 | 64 | 54/62 | 87 |
Brachycephaly | HP:0000248 | 8/19 | 42 | 17/42 | 40 | 44/67 | 66 |
Low anterior/posterior hairline | HP:0000294/HP:0002162 | 14/23 | 61 | 30/43 | 70 | 57/67 | 85 |
Arched eyebrows | HP:0002553 | 18/27 | 67 | 32/44 | 73 | 54/67 | 81 |
Synophrys | HP:0000664 | 19/28 | 68 | 37/46 | 80 | 61/67 | 91 |
Thick eyebrows | HP:0000574 | 20/24 | 83 | 37/46 | 80 | 61/67 | 91 |
Long eyelashes | HP:0000527 | 21/26 | 81 | 38/45 | 84 | 65/67 | 97 |
Concave nasal ridge | HP:0011120 | 24/29 | 83 | 20/43 | 47 | 57/67 | 85 |
Upturned nasal tip | HP:0000463 | 19/27 | 70 | 26/46 | 57 | 58/67 | 87 |
Short nose | HP:0003196 | 23/26 | 88 | 26/46 | 57 | 58/67 | 87 |
Long and/or smooth philtrum | HP:0000343/HP:0000319 | 26/29 | 90 | 27/43 | 63 | 54/67 | 81 |
Thin upper lip vermillion | HP:0000219 | 23/29 | 79 | 33/44 | 75 | 22/24 | 92 |
Thin lips, downturned corners mouth | HP:0002714 | 16/27 | 59 | 33/46 | 72 | 23/24 | 96 |
Highly arched palate | HP:0000218 | 8/22 | 36 | 11/37 | 30 | 35/67 | 52 |
Cleft palate or submucous cleft palate | HP:0000175/HP:0410031 | 6/25 | 24 | 10/45 | 22 | 20/67 | 30 |
Widely spaced or absent teeth | HP:0000687/HP:0006349 | 2/20 | 10 | 13/44 | 30 | 18/23 | 78 |
Micrognathia | HP:0000347 | 8/23 | 35 | 18/45 | 40 | 50/67 | 75 |
Low-set and/or malformed ears | HP:0000369/HP:0000377 | 14/26 | 54 | 18/45 | 40 | 45/67 | 67 |
Major limb malformation | HP:0001180/HP:0009776 | 0/29 | 0 | 0/49 | 0 | 17/67 | 25 |
Small hands | HP:0200055 | 5/27 | 19 | 32/45 | 71 | 53/63 | 84 |
Proximally placed thumb | HP:0009623 | 6/18 | 33 | 18/44 | 41 | 11/20 | 55 |
Clinodactyly 5th finger | HP:0004209 | 13/24 | 54 | 21/45 | 47 | 42/63 | 67 |
Short 5th finger | HP:0009237 | 23/28 | 82 | 21/45 | 47 | 42/63 | 67 |
Syndactyly hands | HP:0006101 | 1/19 | 5 | 1/37 | 3 | 4/63 | 6 |
Abnormal palmar crease | HP:0010490 | 9/21 | 43 | 5/40 | 13 | 21/29 | 72 |
Dislocated elbow/abnormal extension | HP:0005021/HP:0001377 | 11/24 | 46 | 2/40 | 5 | 20/34 | 59 |
Small feet | HP:0001773 | 3/27 | 11 | 29/44 | 66 | 65/67 | 97 |
Syndactyly 2nd–3rd toes | HP:0004691 | 4/24 | 17 | 13/46 | 28 | 21/66 | 32 |
Scoliosis | HP:0002650 | 2/20 | 10 | 4/40 | 10 | 1/42 | 2 |
Hip dislocation or dysplasia | HP:0002827/HP:0001385 | 2/19 | 11 | 2/40 | 5 | ||
Ptosis | HP:0000508 | 11/26 | 42 | 4/40 | 10 | 8/42 | 19 |
Visual impairment | HP:0000505 | 0/24 | 0 | 20/38 | 53 | 29/66 | 44 |
Myopia ≥ − 6.00 D | HP:0011003 | ≤ 2/24b | ≤8 | 11/40 | 28 | 6/40 | 15 |
Hearing loss | HP:0000365 | 8/24 | 33 | 16/39 | 41 | 43/66 | 65 |
Seizures | HP:0001250 | 2/22 | 9 | 20/44 | 45 | 10/66 | 15 |
Cutis marmorata | HP:0000965 | 3/23 | 13 | 19/44 | 43 | 27/43 | 63 |
Hirsutism | HP:0001007 | 10/26 | 38 | 37/47 | 79 | 37/43 | 86 |
CNS major and minor malformations (MRI brain) | HP:0012443 | 2/5 | 40 | 5/43 | 12 | ||
Heart (major and minor) | HP:0001627 | 9/23 | 39 | 13/44 | 30 | 18/66 | 27 |
Major malformation of gut | HP:0012718 | 4/30 | 13 | 3/44 | 7 | 6/24 | 25 |
Diaphragmatic hernia | HP:0000776 | 1/30 | 3 | 1/40 | 3 | 6/24 | 25 |
Gastroesophageal reflux disease | HP:0002020 | 13/25 | 52 | 25/42 | 60 | 47/66 | 71 |
Genitourinary system majorc | HP:0000119 | 1/20 | 5 | 4/42 | 10 | 0/67 | 0 |
Genitourinary system minor | HP:0000119 | 8/23 | 35 | 9/40 | 23 | 46/67 | 69 |
HPO ID human phenotype ontology identifier, CNS central nervous system
aOnly features which could be compared across at least two cohorts are presented. Full clinical description with individual data are presented in supplementary Table S3
b2 of the 24 cases have myopia but unspecified severity
cUni/bilateral renal anomalies