TABLE 1.

Summary characteristics of whole-genome sequencing of uncommon serotypes of Shiga toxin-producing E. coli

Strain codea	Serotypeb	STc	Genome size (bp)	No. of contigs	% GC content	N50 (bp)	No. of reads	Genome coverage (×)	SRA accession no.	GenBank accession no.
STEC_170836	O185:H28	ST-517	5,162,389	112	50.64	15,2751	1,128,853	56.44	SRX6741578	VZEL00000000
STEC_180018	O69:H11	ST-14	5,399,941	260	50.38	131,480	1,148,343	57.42	SRX6741577	VZEP00000000
STEC_180309	O118/O151:H16	ST-73	5,478,013	293	50.42	92,792	968,438	48.42	SRX6741575	VZFK00000000
STEC_180427	O118/O151:H16	ST-335	5,416,226	310	50.41	90,305	1,067,885	53.39	SRX6741582	VZEC00000000
STEC_180452	O55:H7	ST-131	5,359,179	151	50.42	311,454	2,824,168	141.21	SRX6741581	VZDR00000000
STEC_180473	O123/O186:H2	ST-658	5,493,863	277	50.42	137,641	1,534,681	76.92	SRX6741580	VZFY00000000
STEC_180505	O118/O151:H16	ST-21	5,419,695	314	50.43	89,301	1,072,233	53.61	SRX6741579	VZGA00000000
STEC_180563	O151:H16	ST-17	5,567,883	310	50.37	82,954	1,129,349	56.47	SRX6741584	VZGH00000000
STEC_180607	O123:H2	ST-21	5,330,230	271	50.58	136,012	1,408,908	70.45	SRX6741574	VZGR00000000
STEC_180727	O88:H25	ST-21	5,016,338	136	50.64	168,851	1,929,340	96.47	SRX6741572	VZDY00000000
STEC_180784	071:H49	ST-21	5,477,716	348	50.44	104,253	1,349,778	67.49	SRX6741571	VZEA00000000

^aAll strains carried stx₁. STEC_170836 carried both stx₁ and stx₂.

^bSerotypes are predicted based on the whole-genome sequencing.

^cST, sequence type determined by MLST.