Table 1.
Summary of Male O. fasciatus Genome Assembly and Annotation
| Draft Scaffolds for Male O. fasciatus | Chromosome-Length Scaffolds Based on Hi-C for Male O. fasciatus | aChromosome-Length Scaffolds Based on Hi-C for Female O. fasciatus | |
|---|---|---|---|
| Genome assembly | |||
| Length of genome (bp) | 795,074,755 | 762,267,613 | 768,808,243 |
| Number of contigs | 2,295 | 1,355 | 1,372 |
| Contigs N50 (bp) | 2,127,178 | 2,183,645 | 2,130,780 |
| Number of scaffold | / | 23 | 24 |
| Scaffold N50 (bp) | / | 32,431,321 | 33,548,962 |
| Genome coverage (X) | 251.1 | 314.6 | |
| Number of contigs (≥100 kb) | 881 | 891 | 708 |
| Total length of contigs (≥100 kb) | 736,155,642 | 733,715,954 | 732,827,446 |
| Mapping rate of contigs (≥100 kb) (%) | / | 99.67 | 99.67 |
| Genome annotation | |||
| Protein-coding gene number | 24,835 | 24,003 | |
| Mean transcript length (kb) | 15.8 | 16.1 | |
| Mean exons per gene | 10.0 | 10.1 | |
| Mean exon length (bp) | 220.1 | 217.7 | |
| Mean intron length (bp) | 1,511.7 | 1,527.4 | |
a
The data were cited from the reference (Yongshuang Xiao, Zhizhong Xiao, Daoyuan Ma, Jing Liu, Jun Li. Genome sequence of the barred knifejaw Oplegnathus fasciatus (Temminck and Schlegel, 1844): the first chromosome-level draft genome in the family Oplegnathidae, GigaScience, Volume 8, Issue 3, March 2019, giz013, doi.org/10.1093/gigascience/giz013).