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. 2009 Dec 17;47(2):148–155. doi: 10.1016/j.jcv.2009.11.015

Table 1.

HBoV primers and probe used in viral genome amplification.

Gene Amplicon Forward primer Reverse primer Size (bp) Reference
NP1 for real-time PCR NP-1 5′-AGAGGCTCGGGCTCATATCA-3′ 5′-CACTTGGTCTGAGGTCTTCGAA-3′ 81 26
Probe 5′ FAM-AGGACCACCCAATCARCCACCTATCGTCT-BHQ1 3′



NS1 for conventional RT-PCR NS-1 5′-TATGGCCAAGGCAATCGTCCAAG-3′ 5′-GCCGCGTGAACATGAGAAACAG-3′ 245 13



VP1 for sequence VP1 5′-CCACTAGTATGCCTCCAATTAAGAGACAGC-3′ 5′-CCTCTAGATTACAACACTTTATTGATGTTTGT-3′ 2016



VP2 VP2-P1 5′-CCCAAGCTTGCATGTCTGACACTGACATTCAA-3′ 5′-CCGCTCGAGTTAATCACAAAAGATGTGAACGC-3′ 480
VP2 VP2-P2 5′-CCCAAGCTTGCATG CAAATACTTTCAAATGGTGCT-3′ 5′-CCGCTCGAGTTATGTGCTTCCGTTTTGTCTTAT-3′ 435
VP2 VP2-P3 5′-CCCAAGCTTGCATGCTAATGTTTAATCCAAAAGTC-3′ 5′-CCGCTCGAGTTA TCTGGTGATAGGAAATCTGTC-3′ 465
VP2 VP2-P4 5′-CCCAAGCTTGCATGCTATACAAAGGAAACCAAACC-3′ 5′-CCGCTCGAGTTACAACACTTTATTGATGTTTG-3′ 474