Table 1.
Name | Classification | Virus structure | Genetic material | Clinical disease | Viral proteins that directly modulate host immune response |
---|---|---|---|---|---|
RV | Family: Picornaviridae | Protein capsid with ‘canyon’ binding site. The canyon regions contain the binding site of the cellular receptor, ICAM-1 | Non-segmented single molecule of linear positive sense RNA | Most frequent cause of common cold (responsible for 30–50% of cases). Second most common virus to cause bronchiolitis. Incidence highest in children <5 years | Not known |
Genus: Rhinovirus | Genome (7.2 kb) | ||||
Species: Human rhinovirus | |||||
RSV | Family: Paramyxoviridae | Enveloped with F and G surface proteins. F protein: virus penetration and syncytium formation. G protein: virus attachment | Non-segmented single molecule of linear negative sense RNA | Major cause of lower respiratory tract infection in young children <5 years. Major cause of pneumonia and bronchiolitis in infants under 1 year of age | NS1 and NS2 proteins—interference of interferon system. G protein: Chemokine mimicry—inhibits the recruitment of cytotoxic cells. Drives Th2 immune response |
Genus: Pneumovirus | Genome (15 kb) | ||||
Species: Human respiratory syncytial virus | |||||
hMPV | Family: Paramyxoviridae | Pleomorphic, enveloped virus with helical nucleocapsid and F and G surface proteins. Similar to RSV, hMPV F and G proteins may be required for infection | Non-segmented single molecule of linear negative sense RNA | Significant cause of lower respiratory tract infection in young children <5 years. Clinical disease similar to RSV | Not known |
Genus: Metapneumovirus | Genome (13 kb) smaller than other pneumoviruses such as RSV | ||||
Species: Human metapneumovirus | |||||
Influenza virus | Family: Orthomyxoviridae | Enveloped with haemagglutinin (H) and Neuraminidase (N) proteins. Influenza A viruses are divided into subtypes based on these two surface proteins | 8 segments of negative strand RNA | Major cause of respiratory infection. In serious cases, influenza causes pneumonia | NS1—interference of interferon system |
Genus: Influenza virus | Genome (12–14 kb) | ||||
Species: Influenza virus A | |||||
Influenza virus B | |||||
Influenza virus C |
F, fusion glycoprotein; G, G attachment glycoprotein; H, haemagglutinin; hMPV, human metapneumovirus; N, neuraminidase; ICAM-1, intracellular cell adhesion molecule 1; NS, non-structural; RV, rhinovirus; RSV, respiratory syncytial virus.