Table 2.
HMPV noncoding regions
| Gene | Putative gene start signal | Putative gene end and intergenic sequences | |
|---|---|---|---|
| N | CAN99-81 | 42-GGGACAAGUGAAA……//…… | 1235-AGUAAUUAAAAAAGU-1249 |
| CAN98-76 | 42-GGGACAAGUGAAA……//…… | 1235-AGUAAUUAAAAAACU-1249 | |
| P | CAN99-81 | 1250-GGGACAAGUCAAA……//…… | 2145-UAGUUUAAUAAAAAUAAACAAU-2166 |
| CAN98-76 | 1250-GGGACAAGUCAAA……//…… | 2145-UAGUUUAAUAAAAAUAAACAAU-2166 | |
| M | CAN99-81 | 2167-GGGACAAGUAAAA……//…… | 2942-UAACAGCCAAGCACCUUGGCCAAGAGCUACUAACUCUA |
| UCUCAUAGAUUAUAAAGUCACCAUUCUAGUUAUAUAAA | |||
| AAUCAAGUUAGAACAAGAAUUAAAUCAAUCAAGAAU-3053 | |||
| CAN98-76 | 2167-GGGACAAGUCAAA……//…… | 2942-UAAAAAUAACUGUCCUAAUCAAUAAUUGCUUAUAUAAU | |
| CUUAAAGAUCAAUGAGCUUAUUAUUAUAGUUAUAUAAA | |||
| AAAUUUAGAACUAGGAAGGUAUUAAUAGAAAGC-3050 | |||
| F | CAN99-81 | 3054-GGGACAAAUAAAA………//…… | 4684-UAGUUAAUUAAAAAUAAAGUAAAUUAAAUUAAAA |
| UAAAAUAAAAUUAAAAUUAAAAUAAAAUAAAAAUAAAA | |||
| AUUU-4759 | |||
| CAN98-76 | 3051-GGGACAAGUAAAA……//……… | 4681-UAGUUAGUUAAUUAAAAAAU-4696 |
Noncoding sequences of hMPV CAN99-81 (cluster 1) and CAN98-76 (cluster 2) are shown in the positive sense. Positions are giving for the first nucleotide of the putative gene start sequences and the first and last nucleotide of the putative gene end and intergenic sequences. Transcriptional stop codons are underlined and the putative gene end signals are bolded.