Table 1.
Geographic origin and isolation date of the eight SBV isolates characterized in the present study. An overview of the samples subjected to complete sequencing of the coding region of the L, M, and S genome segments, respectively, is provided. GenBank accession numbers referring to the original isolates (i.e. viremic field sera, no cell culture passaging) are also listed. The sequence of the S segment was not deposited since it was identical in all eight viruses studied.
| SBV isolate no. | Isolation date | Geographic Origin |
GenBank accession numbers segment |
P10** sequencing | |||
|---|---|---|---|---|---|---|---|
| Community | Canton | Country | L | M | |||
| B80/11-4* | 11/2011 | Schmallenberg | NRW | Germany | HE649912 | HE649913 | No |
| 79.4 | 20/07/2012 | Mühleberg | BE | Switzerland | KM047416 | KM047423 | No |
| 91.1 | 24/07/2012 | Sigigen | LU | Switzerland | KM047417 | KM047424 | No |
| 96.1 | 26/07/2012 | Courcelon | JU | Switzerland | KM047418 | KM047425 | Yes |
| 100.3 | 26/07/2012 | Curio | TI | Switzerland | KM047419 | KM047426 | Yes |
| 102.2 | 27/07/2012 | Niederried | BE | Switzerland | KM047420 | KM047427 | No |
| 175.2*** | 13/08/2012 | Bendern | na | Liechtenstein | KM047421 | KM047428 | Yes |
| 200.2*** | 17/08/2012 | Bendern | na | Liechtenstein | KM047422 | KM047429 | No |
na: Not applicable.
*
Reference strain (cell culture supernatant from German SBV isolate B80/11-4).
**
P10 sequences were not submitted to GenBank.
***
Two subsequent cases from the same cattle holding to determine the in-herd heterogeneity of SBV.