Table 5.
Variations of nucleotide sequences within non-coding regions and amino acid sequences within coding regions of WU polyomaviruses
| Accession no./isolate name | Variations of nucleotide sequences in non-coding regions |
Variation of deduced amino acid in coding sequences |
||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4 | 32 | 286 | 2797 | 4522 | 4559 | VP2 |
VP1 | LTAg |
||||||||
| 239 | 250 | 284 | 256 | 79 | 360 | 378 | 440 | 520 | 594 | |||||||
| NC_009539/WU Ref strain | t | g | c | a | a | t | E | E | D | T | T | D | D | V | G | I |
| EF444549/WU strain B0 | t | g | c | a | a | t | E | E | D | T | T | D | D | V | G | I |
| EF444550/WU strain S1 | t | g | c | a | g | t | E | Q | D | T | T | D | D | V | G | L |
| EF444551/WU strain S2 | t | g | c | a | g | t | E | Q | D | T | T | D | D | V | E | L |
| EF444552/WU strain S3 | t | g | c | t | g | t | E | Q | D | T | T | G | D | V | G | L |
| EF444553/WU strain S4 | t | c | c | a | g | t | E | Q | D | T | T | D | D | V | G | L |
| EF444554/WU strain S5 | c | g | c | a | g | t | E | Q | H | T | T | D | G | I | G | L |
| EU358768/WU Thailand CU_295 | t | g | c | a | g | t | E | E | D | T | T | D | D | V | G | I |
| EU358769/WU Thailand CU_302 | t | g | g | a | g | a | Q | E | D | I | G | D | D | V | G | I |