Table 6.
Variations of nucleotide sequences within non-coding regions and amino acid sequences within coding regions of KI polyomaviruses
| Accession no./isolate name | Variations of nucleotide sequences in non-coding regions |
Variation of deduced amino acid in coding sequences |
|||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 60 | 76 | 107 | 110 | 233 | 4656 | VP2 |
VP1 |
LTAg |
STAg | ||||||||
| 246 | 316 | 181 | 267 | 368 | 124 | 199 | 337 | 365 | 494 | 104 | |||||||
| NC_009238/KI Ref strain | – | t | t | t | c | a | T | P | K | Q | A | E | Y | V | L | Q | D |
| EF127906/KI Stockholm 60 | – | t | t | t | c | a | T | P | K | Q | A | E | Y | V | L | Q | D |
| EF127907/KI Stockholm 350 | – | c | c | g | a | t | S | P | K | Q | T | E | Y | V | V | Q | E |
| EF127908/KI Stockholm 380 | – | a | c | g | a | a | T | P | K | Q | A | E | Y | V | V | H | D |
| EF520287/KI isolate Brisbane 001 | aggcgctgcg | t | c | a | a | t | S | S | R | Q | A | E | Y | L | V | Q | E |
| EF520288/KI isolate Brisbane 002 | – | t | t | t | c | a | T | P | K | Q | A | E | Y | V | L | Q | D |
| EF520289/KI isolate Brisbane 003 | – | t | a | g | a | t | S | P | K | H | A | E | Y | V | V | Q | E |
| EU358766/KI Thailand CU_255 | aggcgctgcg | t | c | a | a | t | S | S | R | Q | A | K | H | L | V | Q | E |
| EU358767/KI Thailand CU_258 | – | t | t | t | c | a | T | P | K | Q | A | E | Y | V | L | Q | D |