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. 2011 Jan 19;11(3):580–586. doi: 10.1016/j.meegid.2011.01.006

Table 3.

Relative abundance of dinucleotides in VP4 [VP8*] and VP7 proteins from P[4]G2 RV-A Brazilian strains and summary of COA.

VP4 [VP8]
UU UC UA UG CU CC CA CG
Mean ± S.D.a 1.490 ± 0.035 0.823 ± 0.024 1.665 ± 0.021 0.846 ± 0.020 0.610 ± 0.022 0.381 ± 0.012 1.157 ± 0.023 0.230 ± 0.035
Axis 1b r −0.261 0.384 −0.427 0.038 −0.010 0.560 0.127 0.453
P 0.040 <0.01 <0.001 0.764 0.928 <0.0001 0.317 <0.001
VP4 [VP8]
AU AC AA AG GU GC GA GG
Mean ± S.D. 1.951 ± 0.033 0.869 ± 0.034 1.979 ± 0.04 1.177 ± 0.032 0.790 ± 0.025 0.282 ± 0.009 1.166 ± 0.019 0.561 ± 0.017
Axis 1 r −0.223 0.104 −0.469 0.584 0.422 0.422 0.628 0.191
P 0.080 0.412 <0.001 <0.001 0.001 0.001 <0.0001 0.133
VP7
UU UC UA UG CU CC CA CG
Mean ± S.D.a 1.547 ± 0.020 0.640 ± 0.011 1.808 ± 0.023 1.142 ± 0.013 0.755 ± 0.018 0.250 ± 0.016 0.987 ± 0.024 0.397 ± 0.014
Axis 1b r −0.249 0.209 0.227 0.180 0.345 0.781 −0.341 0.126
P 0.054 0.105 0.080 0.164 <0.01 <0.001 <0.01 0.327
VP7
AU AC AA AG GU GC GA GG
Mean ± S.D. 2.056 ± 0.029 1.167 ± 0.020 1.948 ± 0.038 0.595 ± 0.037 0.793 ± 0.025 0.330 ± 0.018 1.013 ± 0.020 0.572 ± 0.024
Axis 1 r −0.223 −0.327 −0.025 0.285 0.419 0.093 0.101 0.320
P 0.085 0.011 0.841 0.027 <0.01 0.471 0.429 0.013
a

Mean values of 58 P[4]G2 RV-A strains’ relative dinucleotide ratios ± standard deviation.

b

Correlation analysis between the first axis in COA and the sixteen dinucleotides frequencies in VP4 [VP8*] and VP7 proteins is shown.