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. 2017 Jul 20;4(2):201–223. doi: 10.1016/S0196-9846(17)30103-9

Table 1.

Laboratory Diagnosis of Gastrointestinal Diseases in Swine

DISEASE SPECIMEN DIAGNOSTIC TEST
Colibacillosis Duodenum Colon contents, feces Bacterial isolation pH (alkaline)
Clostridium perfringens type C enteritis Jejunum, ileum (fixed) Histopathology
Jejunum, ileum (nonfixed) Gram stain of mucosal scraping
Contents of jejunum and ileum, peritoneal fluid (refrigerated or frozen) Mouse neutralization test
Salmonellosis Jejunum, ileum, colon, liver (fixed and nonfixed), feces Histopathology, bacterial isolation
Swine dysentery Cecum, colon (fixed) Histopathology
Cecum, colon (nonfixed), feces Dark field examination, culture, Victoria blue 4-R stain of mucosal smear, immunofluorescent antibody test
Proliferative enteritis (Campylobacter sputorum infection) Ileum, lower jejunum (fixed) Histopathology, Warthin-Starry stain
Ileum, lower jejunum (nonfixed) Electron microscopy, acid fast stain of mucosal impression smears
Serum Microtiter agglutination
Transmissible gastroenteritis (TGE) Jejunum (fixed)
Jejunum (nonfixed)
Intestinal content (large and small), feces
Serum
Histopathology
Subgross examination, fluorescent antibody test, electron microscopy
Electron microscopy, pH (acid)
Serum neutralization test
Other enteric viruses
 Rotaviruses
 Coronaviruses (Not TGE)
 Caliciviruses
 Adenoviruses
 Astroviruses
Intestinal content, feces, small intestine (nonfixed)
Small intestine (fixed)
Electron microscopy, fluorescent antibody test
Histopathology
Coccidiosis Jejunum (fixed)
Jejunum (nonfixed)
Histopathology
Direct microscopic examination of fresh scrapings, Wright’s stain
Cryptosporidiosis Colon (fixed, nonfixed) Feces Histopathology, electron microscopy
Smear, flotation
Stomach worms (Ascrops, Hyostrongylus, Physocephalus spp.) Stomach Necropsy examination
Ascaris suum Small intestine, liver, lung Feces Necropsy, histopathology
Ova detection (flotation, smear)
Strongyloidiases Small intestine (nonfixed)
Small intestine (fixed) Feces
Microscopic exam of mucosal scraping
Histopathology
Ova detection (flotation, smear)
Macracanthorhynchus hirudiaceus Small intestine Necropsy examination
Trichuris suis Cecum, colon
Feces
Necropsy examination
Ova detection (flotation, smear)
Oesophagostomum Colon Necropsy examination
Gastric ulcers Stomach (intact)
Feces
Gross and histopathology
Occult blood
Intestinal hemorrhage syndrome Small intestine, mesenteric lymph nodes Gross necropsy examination