Table 2.
Detection limit of LAMP vs. TaqMan PCR using 10-fold serially diluted plasmid standards.
| Strains | Dilution of plasmid coding MNV ORF1–ORF2 junction region (copies) |
|||||||
|---|---|---|---|---|---|---|---|---|
| 107 | 106 | 105 | 104 | 103 | 100 | 10 | 1 | |
| 1.CW1 | 3/NT | 3/3 | 3/3 | 3/3 | 3/3 | 0/3 | 0/3 | NT/0 |
| 4 | 3/NT | 3/3 | 3/3 | 3/3 | 3/3 | 1/3 | 0/3 | NT/0 |
| Apo960 | 3/NT | 3/3 | 3/3 | 3/3 | 3/3 | 1/0 | 0/0 | NT/0 |
| Berlin/04/06 | 3/NT | 3/3 | 3/3 | 3/3 | 3/3 | 1/3 | 0/2 | NT/0 |
| KHU-1 | 3/NT | 3/3 | 3/3 | 3/3 | 3/3 | 0/3 | 0/1 | NT/0 |
| MT30-2 | 3/NT | 3/3 | 3/3 | 3/3 | 3/3 | 1/3 | 0/3 | NT/0 |
| NIH-2747 | 3/NT | 3/3 | 3/3 | 3/3 | 3/3 | 2/3 | 0/3 | NT/0 |
| S7-PP3 | 3/NT | 3/3 | 3/3 | 3/3 | 3/3 | 1/3 | 0/3 | NT/0 |
| TW2007 | 3/NT | 3/3 | 3/3 | 3/3 | 3/3 | 0/3 | 0/3 | NT/0 |
| WU11 | 3/NT | 3/3 | 3/3 | 3/3 | 3/3 | 0/3 | 0/3 | NT/0 |
The results are shown as number of LAMP positives/number of TaqMan PCR positives (N = 3). NT, not tested.