. 2006 Aug 8;329(10):751–764. doi: 10.1016/j.crvi.2006.07.001

Table 3.

Classification of CLSs detection according to non-primate mammal lentiviral families

	HIV-1		HIV-2		Bovine		Equine		Feline		Caprine		Ovine		Ov./Cap.
MMy 1	●^a	PBS – U5^b	●	PBS – U5			●	PBS – LTR	●	PBS
MMy 31	●	pol (p15)	●	pol			●	pol					■	pol
MMy 32	●	pol (p31)	●	pol							●	pol	●	pol
CLS 1	●	pol (p31) /	●	pol / vpr					■	pol / env	■	pol	■	env
		pol (p31)
CLS 2	●	pol (p31) / nef	●	pol / nef			●	gag
CLS 3	●	gag (p6) –	○	pol	●	pol	●	pol	■	pol					■	pol
		pol (p10)
CLS 4	●	gag (p24)	●	gag / env	■	gag / pol	●	gag	■	gag / pol	■	env			■	pol
CLS 5	●	gag (p24)	●	gag							■	pol	■	pol	●	pol
CLS 10	●	gag / pol (p51)	○	env							●	vif
CLS 11	●	pol (p31) /											■	env	●	env
		env (gp120-V3)
CLS 13	●	pol (p31) /									■	n.a.^c
		env (gp120-V4)
CLS 16	●	pol (p31)	■	pol					■	pol
CLS 17	○	vif	●	env							■	pol
CLS 18			●	gag / gag / pol					■	pol
CLS 20			●	env					■	pol

Detection degree of the tested CLS in the genomes: (●) at least 90%; (■) comprised between 10% and 89%; (○) less than 10%.

Gene location of the CLSs: genes separated by ( / ) when CLS was detected on each of the two genes; genes separated by (–) when CLS overlapped the 2 genes; gene indicated in italics when CLS was present at an occasional position.

n.a.: not attributed.