Table 1.
Noroviruses, original outbreaks and carbohydrate-bindinga
Carbohydrate-bindingb | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Virus Name | Accession Number | G | gc | Outbreak Site | Year | Lec | H1 | Lea | Leb | H2 | Lex | Ley | H3 | A | B |
Norwalk | M87661 | I | 1 | Norwalk, OH, USA | 1968 | o | + | o | + | + | o | + | + | + | o |
Hawaii | U07611 | II | 1 | Hawaii, USA | 1971 | nd | o | o | o | nd | nd | nd | o | o | o |
Snow Mountain | AY134748 | II | 2 | Snow Mountain, CO, USA | 1976 | nd | o | o | o | nd | nd | nd | o | o | +s |
Mexico | U22498 | II | 3 | Mexico City, Mexico | 1988 | nd | +s | nd | +s | nd | nd | nd | nd | +s | +s |
Grimsby | AJ004864 | II | 4 | Grimsby, UK | 1995 | o | + | o | + | + | o | + | nd | +sr | +sr |
VA387 | AY038600 | II | 4 | Virginia, USA | 1998 | nd | +s | o | +s | nd | o | +s | nd | + | + |
MOH | AF397156 | II | 5 | Three cities in Hungary | 1999 | nd | +s | o | +s | nd | o | n | nd | + | + |
VA207 | AY038599 | II | na | Virginia, USA | 1997 | nd | o | +s | o | nd | +s | n | nd | o | o |
Abbreviations: G, genogroup; gc, genetic cluster; Le, Lewis; na, not assigned [4] or nominally assigned gc 8 [19]; nd, not done; o, no binding; +, binding; +sr, binding inferred by saliva and red blood cell binding assays; +s, binding inferred by saliva binding assays.
Carbohydrates listed below. Lec: H type 1 precursor, Galβ1,3GlcNAcβ-H1: H type 1, Led, Fucα1,2Galβ1,3GlcNAcβ-Lea: Galβ1,3(Fucα1,4)GlcNAcβ-Leb: Fucα1,2Galβ1,3(Fucα1,4)GlcNAcβ-H2: H type 2, Fucα1,2Galβ1,4GlcNAcβ-Lex: Galβ1,4(Fucα1,3)GlcNAcβ-Ley: Fucα1,2Galβ1,4(Fucα1,3)GlcNAcβ-H3: H type 3, Fucα1,2Galβ1,3GalNAcα-A: GalNAcα1,3(Fucα1,2)Galβ-B: Galα1,3(Fucα1,2)Galβ-