Table 2.
Percentage identity of the Bo/Thirsk10/00/UK partial RdRp, complete capsid, and complete ORF3 genes to the UK and German reference BoCVs Bo/Newbury2/76/UK and Bo/Jena/80/DE
| RdRpa |
Capsid |
ORF3 |
||||
|---|---|---|---|---|---|---|
| Nucleotide | Amino acid | Nucleotide | Amino acid | Nucleotide | Amino acid | |
| Bo/Newbury2/76/UK | 76 | 89 | 85 | 94 | 84b | 88b |
| Bo/Jena/80/DE | 88 | 98 | 67 | 68 | 60 | 61 |
Identities closest to either Bo/Newbury2/76/UK or Bo/Jena/80/DE are in bold text.
a
The partial RdRp sequence was 583 nucleotides and 193 translated amino acids.
b
The Bo/Jena/80/DE and Bo/Thirsk10/00/UK ORF3 initiation codon was used.