TABLE 7.1.
Defined and putative promoter sequences of some caulimoviruses and badnaviruses
as-1 sequence | TATA sequences | Transcription start | Poly(A) signal | |||||
---|---|---|---|---|---|---|---|---|
CaMV | 7850 | cacTGACGtaagggaTGACGcac | 34 | ctcTATATAAgca | 21 | ACACGCG | 154 | atcAATAAAttt |
CVMV | 7380 | tgaAGACGtaagcacTGACGaca | 34 | tccTATATAAgga | 24 | AAGAAAA | ||
FMV | 6857 | gtaTGACGaacgcacTGACGacc | 13 | ctcTATATAAgaa | ||||
MMV | aaaTGACGtaagccaTGACGtct | 21 | tccTATATAAgga | 15 | GAAGAGA | 186 | atcAATAAAata | |
BSV | 7083 | tagTCACGcacga–TGACCttt | 181 | ctcTATATAAgga | 20 | ACACGCA | ||
RTBV | 7370 | cagTATATAAgga | 21 | TCATCGA | 184 | atcAATAAAgct |
In the transcription start sequences, the nucleotide indicated in ‘outline' is +1 of the transcript. Gaps are where reliable information is not available.
Data from: Sanger et al. (1990); Bao et al. (1993a); Verdaguer et al. (1996); Harper and Hull (1998); Dey and Maiti (1999); all with permission.
© 2002