Table 1.
Sample | length | Reads | Bases | Q20 (%) | Q30 (%) |
---|---|---|---|---|---|
A1 | 147.32 | 40811558 | 6012389770 | 95.73 | 88.78 |
A2 | 147.38 | 62030546 | 9141997823 | 95.75 | 89.47 |
A3 | 147.53 | 60816138 | 8972430801 | 95.93 | 89.89 |
B1 | 147.45 | 67018594 | 9882123005 | 95.88 | 89.72 |
B2 | 147.49 | 55217110 | 8143748191 | 96.01 | 90.04 |
B3 | 147.41 | 66504646 | 9803127605 | 95.89 | 89.78 |
C1 | 147.18 | 52310564 | 7699225784 | 95.85 | 89.70 |
C2 | 147.28 | 55806604 | 8219088002 | 95.85 | 89.69 |
C3 | 147.21 | 63509302 | 9349372301 | 96.02 | 90.10 |
Q20, Q30 refer to the proportion of base calls with Phred scores >20 or 30 in the total bases. Higher scores ensured the base calling accuracy and data quality. Each group has three biological replicates.